Gene Mmc1_1941 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1941 
Symbol 
ID4480454 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2414853 
End bp2415218 
Gene Length366 bp 
Protein Length121 aa 
Translation table11 
GC content52% 
IMG OID639722689 
Productnitrogen fixation-related protein 
Protein accessionYP_865855 
Protein GI117925238 
COG category[S] Function unknown 
COG ID[COG1433] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.000861237 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTG CTGTCACCAG CCAGAACAAA CACAGCGTCA CCGGCCATGC GGGTAAGTGC 
CGTAAATTTT GGATTTATGA GATTAAAGAA AATGCCATTG AGGGTCGCAC ACTGCTGGAA
CTGCCTATGG AGCAGGCTTT TCACAACAGC TCGCCCCACG AGCCTCACCC CTTAGATAAC
ATACAGGTGT TCATCACGGG CGGAATGGGC GGTGGCGTGC GCCAACGTTT GACCAGCAAA
GGCATTGATT GTGTCATCAC CGAAGAGAGT GACCTAGAAA CGGCGGTTAA GCACTATCTG
GCCCACCTAG CCAAGGGGGA GCCTTTATCC GGCAAACAGA TCCCTATCCA CATCCGCGAA
GCTTAA
 
Protein sequence
MKIAVTSQNK HSVTGHAGKC RKFWIYEIKE NAIEGRTLLE LPMEQAFHNS SPHEPHPLDN 
IQVFITGGMG GGVRQRLTSK GIDCVITEES DLETAVKHYL AHLAKGEPLS GKQIPIHIRE
A