Gene Mmc1_1909 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1909 
Symbol 
ID4481131 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2373885 
End bp2374337 
Gene Length453 bp 
Protein Length150 aa 
Translation table11 
GC content51% 
IMG OID639722654 
Productmonoheme cytochrome SoxX (sulfur oxidation) 
Protein accessionYP_865823 
Protein GI117925206 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00277827 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.155687 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTATCTT TCAAAAAGTT CACACCGGTC TTCATGGCGA CGGCCATGTT GGTCTCCGGC 
TGTGCCACCA CGGGGTCAGC AACGGATGCG ACCACCGAAA TGGGCATTGT CAAGCCGCTG
ACCGATAAAC CCGGCGACCC TGTGAACGGC AAAAAGCTGG TCATGGCCCG CGACAAGGGT
AACTGTATCG CGTGTCATTG GCTGCCCGAG GCGACCTTTC CAGGCAATGC GGGTCCAAAT
CTGTATGAGG CGATTCGCAA TAATGAGCGC TCCGTGGGTT GGATACGTCA AAAGATTGTA
AACCCCAAGG TGGATAATCC AGACACCCTG ATGTTCACAT TTTATGACAA CACAGGTAAG
CACAATCTAC GTAAAGATTG GCGTGGTAAG CGGGTTTTAG AAGCCCAAGA GGTTGAAGAT
GTGATCGCTT TTCTACTGAC CTTGCGTAAA TAA
 
Protein sequence
MLSFKKFTPV FMATAMLVSG CATTGSATDA TTEMGIVKPL TDKPGDPVNG KKLVMARDKG 
NCIACHWLPE ATFPGNAGPN LYEAIRNNER SVGWIRQKIV NPKVDNPDTL MFTFYDNTGK
HNLRKDWRGK RVLEAQEVED VIAFLLTLRK