| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1848 |
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| Symbol | |
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| ID | 4480700 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2293105 |
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| End bp | 2295408 |
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| Gene Length | 2304 bp |
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| Protein Length | 767 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639722590 |
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| Product | surface antigen (D15) |
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| Protein accession | YP_865762 |
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| Protein GI | 117925145 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG4775] Outer membrane protein/protective antigen OMA87 |
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| TIGRFAM ID | [TIGR03303] outer membrane protein assembly complex, YaeT protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000000894118 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACCTG CCCTTTTTTT TCGAATCACT ACGCTGTTTG TTCTGACACT GCTGTTGTTA
CTACCGGTCG GTAGTGCCTC GGCTCAGTCC AATGGGGAGA CCATTGTTAA CATTGACGTG
CAAGGCGCGC GTTGGATCGA AAAAGAGACG GTTAAGAGCT ATCTTGAATT GGAACCAGGA
GATGCCTTCC AAGCTCAAAA GTTGGCGAAC TCCCTACGAG CTTTGCACAA AACCGGCTTT
TTTAAGGATG TAAAATTTGA GCGTGAGGGC TCCACCCTGG TGGTTAAGGT TGTGGAAAAC
CCCATGATTC ACGAGATTAC CTTTTCTGGT AACGATGCCT TAGGGACCGA TGAGTTGAAG
GGGATGATCA AACTCAAGGT GCGAGATATC TATAACCAAA GCAAATCTCA GAGTGACTTG
GCTAACTTGC AGCAAGCTTA CCGTATTAAG GGTCTGTTTT TAGCCAATAT TGATCTAGAG
GTTAAAACTC TTTCTGATAA CCGTGTGGCA CTCACCTTCG ATATTAAGGA AGGGGAGAAG
TCTAAGGTGC GGGAGGTTCG CATCATCGGT AACAAAAATA TCAGCGAGAA AAAATTGCGC
AATGCCCTCA GCATTCAACC CACCGATTGG CTCTCTTGGT TGACGGAAAA AAACACCTAC
GACAAAGAGA AACTGCTGTA CGATAAAGAG CAGTTACGCA ATGTCTACCA GGATGAGGGA
TTTGCGCGGG TTGAGGTTAA CTCCTCCATT GCCGAACTGA CCCCCGATAA AAAGGCGTTT
GTGATCACCC ATGCGCTTAC GGAGGGGGAT CGTTATAAAT TTGGCAAGAC CACCATTTCA
GGGGATTTTG ACGAACTGCC CGAGGCCAAA CTCTATGAAG CCTTAAAGAT TTACGAAGGG
GAGTGGTTTT CTCGTTCTGC GGTACGTCTA TCCATTGAGA AACTCACCGA TTTGGTTGGT
GATTTTGGTT ACGCTTTCCT AGATATTCAG CCACGCATTG ACTATGACGA TGAAGCCAAG
CTGGTTGCCC TGCATTTTGA GATCATCAAA GGGCGCCGTG TTTATGTCAA CCGTGTGGAT
GTGGTGGGCA ACACCCGTAC CCGTGATAGT GTCATTCGCC GTATGGTACA GGTGGTCGAG
GGGGACCGTT TTTCATCGAC CAAGGTACGT CAAACCAAAA AAGATCTACA ACGGTTAGAC
TTTTTTGAAA AGGTTGAGAT TGAGACACCC CAGACTCAAG ATCCCGATCA GGTCAATGTT
AAAGTTAAGG TAGAAGAAAA ACCCACGGGT TCGTTCTCCA TTGGTGCGGG TTTCTCTACA
ACAGATAAAA TTGTGACCTC GGCCAGTATA TCCCAGAAAA ACTTTTTGGG GCGTGGTCAA
AATCTCTCGG CTTCGGCGGC GCTCTCTGCG AGTACGGCGG ATTTTGATAT TTCGTTTACC
GAACCCTATT TTCTGGGTAA GCCCATTTCG GCGGGGATTG ATCTTTATAA CCGTAAGGTG
GAAGATTCAA GCACCTCATC CTATGACCGC TCCACCTATG GTATGGGGCT GCGCCTTGGG
GCACCTCTGT CCGATGAACT CTATAACAGC GTTTCCTATA ACTTACGCCA TGTAGAGATC
CATAATGTGG ATTCTACCGC CTCAACCTAC ATTCAAGCGC AGTATGCCAA CAGCCCCTAT
CTGCAATCCA TGTTAAGCTA CAACTTAAAC TGGAACATGT TACAGCAAGA AGAGACCGGT
TTGGTTGGGG GGCGTAGCCA TAGCGTGACC ACGGATCTTT CTGGTTTGGG TGGGGATGTT
AAATTTGTCC GGGTCTCCTC GGATAACCAT CTCTATCACT CCATTAGACC CATGGGCAAA
CTGGTGGCGC ACTTACGCTT AAAGGGCGGT GTTGTTGAAA GCTGGGATGG TGATGTGCCC
ATTTATGAAA AGTTTCAGCT TGGCGGGCCA CAGTCGGTCA GAGGCTTTAA AAATAGTGGC
CTAGGCCCAC GGGCCATTGT CGATGGGGAC TCCATGGGGG GGAACTACTA CGCCATGACC
AATATGGAAC TCATTTTCCC CATGATCGGC CTGGAGGACA AAGGGGTTAA GGGTATTACC
TTTATTGATG CGGGTATTTT GAGTAACTTT GACCCGCTTG GGGTGGATGT CAATGAATCG
GGGGCGCCAC GGGTATCGGC TGGGGTTGCT GTCGATTGGA AATCCCCGTT TGGGCCCCTG
CGCTTTAACT TGGCTTTCCC GGTTAAAAAA GAGAATTGGG ATAGTCCACG GGCCTTTGAC
TTTAGTGTAG GAACCGCGCT GTAA
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| Protein sequence | MKPALFFRIT TLFVLTLLLL LPVGSASAQS NGETIVNIDV QGARWIEKET VKSYLELEPG
DAFQAQKLAN SLRALHKTGF FKDVKFEREG STLVVKVVEN PMIHEITFSG NDALGTDELK
GMIKLKVRDI YNQSKSQSDL ANLQQAYRIK GLFLANIDLE VKTLSDNRVA LTFDIKEGEK
SKVREVRIIG NKNISEKKLR NALSIQPTDW LSWLTEKNTY DKEKLLYDKE QLRNVYQDEG
FARVEVNSSI AELTPDKKAF VITHALTEGD RYKFGKTTIS GDFDELPEAK LYEALKIYEG
EWFSRSAVRL SIEKLTDLVG DFGYAFLDIQ PRIDYDDEAK LVALHFEIIK GRRVYVNRVD
VVGNTRTRDS VIRRMVQVVE GDRFSSTKVR QTKKDLQRLD FFEKVEIETP QTQDPDQVNV
KVKVEEKPTG SFSIGAGFST TDKIVTSASI SQKNFLGRGQ NLSASAALSA STADFDISFT
EPYFLGKPIS AGIDLYNRKV EDSSTSSYDR STYGMGLRLG APLSDELYNS VSYNLRHVEI
HNVDSTASTY IQAQYANSPY LQSMLSYNLN WNMLQQEETG LVGGRSHSVT TDLSGLGGDV
KFVRVSSDNH LYHSIRPMGK LVAHLRLKGG VVESWDGDVP IYEKFQLGGP QSVRGFKNSG
LGPRAIVDGD SMGGNYYAMT NMELIFPMIG LEDKGVKGIT FIDAGILSNF DPLGVDVNES
GAPRVSAGVA VDWKSPFGPL RFNLAFPVKK ENWDSPRAFD FSVGTAL
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