| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1827 |
|---|
| Symbol | |
|---|
| ID | 4480443 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2264899 |
|---|
| End bp | 2266365 |
|---|
| Gene Length | 1467 bp |
|---|
| Protein Length | 488 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639722569 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865741 |
|---|
| Protein GI | 117925124 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.698781 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCAACAC TTAATTTAAC CCAGATTGTT AACCACCGCC TCTGTCCCAA ACGGGTCTGG
TTGCATCAAA AGGCGCCCCA TTTGGCCCAA ACAGAGGATC TTCTGCGTCC ACGTCTGCTT
GAGCAGCTCT ACAGCTATCT TACGCAAACC TATGTAAACC CTTGGCTGCC ATCCCAAGAG
CTCGAACCAG CGTCACGGTT GACCGCCACC ACACAGGCGT TGCATAGCAC CATTTCTTCC
GCCTATGTGC GCCCCTTTTT ACATGCGCAC GGGGTTTATG TCGAAGCGGG TATTTTAGTG
CCACTTAAAA AAGGCTATCA ACTGCTTTGG CCACGCGCCG CCACCCGGTT AAAACCTCGT
TATATTGAAG AGGCTGCCAT TGCCGCATGG TTGGCAACCC AGATGGGGTT AACCATTGAG
AGTGTGCATG TCGTGACCTT GAATAAGCGG TTTCACCATC AGGGGGTGGG ACGCAACAGC
CATTTGCTTA AACCTGTGGT GGTGGATCTG CCCATGCAGG GCGTTTTGCC TCAGGTGCAG
GGTTGGATCG AAGCATGCCA TGCAACCCTG CAACAGGAGG TTGCCCCCCA GCAGAGCATG
GGGAGCCACT GCCATCGTCA ACACTGCCCC TTTTTGAACC ATTGCAGCCC GGCTTTGTGT
GCAGACGACC ACCCCATTCG CTGGCTCTCG CGCGCGCCGG ATCTGGTTAA GGGTCTGGAG
CAACAGGGCT ATGCTGACCT AAAACAGGTG CCTATGAACC TGTTGCAAAA ACGCCATCAT
CAACGCATGG CGAGAGTCGC CCGCAGTGGT TACGCCGAAC TGGATGAGAG GGTCGCAAAG
ATTTTACAGG CCCTACCCTA CCCGCGCTAT TTTGTCGACT TTGAAACCGT CTCCTTTGCC
GTTCCCCCCT GGGATGGGGT TAACCCTATC ATTTCCCAAG TACCCTTTCA GTGGTCCTGC
CACATTCAAC AAGCGGATGG AGAGCTGCAC CATCTGGGGT TTCTGGCCCC TCCAGGTGAG
GATCCACGGC GACGTTTTAG TGAAACATTG TTGCATGCTA TTGGCGATGA AGGCCCCATC
TTTGTCTACA ACGCCAGCTT TGAAAAGGGA CGCATGCAGG AGATGGCGCA GCGTTTTAGC
GATTTGGCCG ACGCTTTAAA AGCCGCTCAA AAACGGGTGG TGGATCTGCA CCCGCTGGCA
AGAGACCATT ACTACCACCC CGCCATGCAG GGCTCTTGGT CCCTGAAAGC CGTTTTGCCA
ACATTAGGCA AAGGGTTAAG TTACACCAAT CTTACCATCG CTGATGGTGA GCAGGCTCAG
GCCCGTTATC TAAGCTGGAT GTTTGACCCC TTAGAAGAGG CGCAAGCACT CCAAATCCAA
CTGGATTTGG AGTGCTATTG CCAATTGGAT ACCCTGGCCT TGGTTATGAT GGTGGAGCGT
TTTGAACAGG GGCTGGAGGC GCGCTAA
|
|---|
| Protein sequence | MPTLNLTQIV NHRLCPKRVW LHQKAPHLAQ TEDLLRPRLL EQLYSYLTQT YVNPWLPSQE
LEPASRLTAT TQALHSTISS AYVRPFLHAH GVYVEAGILV PLKKGYQLLW PRAATRLKPR
YIEEAAIAAW LATQMGLTIE SVHVVTLNKR FHHQGVGRNS HLLKPVVVDL PMQGVLPQVQ
GWIEACHATL QQEVAPQQSM GSHCHRQHCP FLNHCSPALC ADDHPIRWLS RAPDLVKGLE
QQGYADLKQV PMNLLQKRHH QRMARVARSG YAELDERVAK ILQALPYPRY FVDFETVSFA
VPPWDGVNPI ISQVPFQWSC HIQQADGELH HLGFLAPPGE DPRRRFSETL LHAIGDEGPI
FVYNASFEKG RMQEMAQRFS DLADALKAAQ KRVVDLHPLA RDHYYHPAMQ GSWSLKAVLP
TLGKGLSYTN LTIADGEQAQ ARYLSWMFDP LEEAQALQIQ LDLECYCQLD TLALVMMVER
FEQGLEAR
|
|---|
| |