| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1767 |
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| Symbol | |
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| ID | 4482593 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 2185093 |
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| End bp | 2186823 |
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| Gene Length | 1731 bp |
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| Protein Length | 576 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722509 |
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| Product | prolyl-tRNA synthetase |
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| Protein accession | YP_865681 |
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| Protein GI | 117925064 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0442] Prolyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00409] prolyl-tRNA synthetase, family II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.621911 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.00303994 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCGTTTCA GCCAGACCCT TATTCCGACC CTTAAGGAGG AGCCCAGCGA GGCTCAAGTT
ATCTCCCATA AACTTATGCT GCGCGCCGGA CTGATCCGTC AGTTGGGGGC GGGTATCTAT
ACTTGGCTGC CCATGGGGCT TAAAGTCTTG CGTAAAGTCG AGACCATCGT CCGTCAAGAG
ATGGACCGGG CGGGTGCGCA GGAGGTGTTG ATGCCCTCCA TCCAACCCGC CGAGTTGTGG
GAGGAGTCGG GACGGTGGAA AATGTATGGC AAAGAGCTGC TGCGCATTAC CGATCGGCAT
AATCGCTCGT TTTGCTACGG CCCTACCCAC GAAGAGGTGA TCTCTGATCT GGTGCGTCGC
GAGATCCACT CCTACAAACA GTTGCCCGCC AATTTTTATC AGATCCAGAC CAAGTTTCGC
GACGAGGTGC GCCCGCGCTT TGGCATCATG CGGGGACGCG AATTTTTGAT GAAGGATGCC
TACTCCTTTG ACATAGACGA GGCTGCTTTG GACAAGAGCT ATCGGCTTAT GTTCGAGGCC
TACAATAAAA TCTTTAACCG ACTGGATCTT AAATTTCGCC CGGTGGAGGC CGACACCGGG
GCCATTGGTG GGGCCTCATC CCACGAGTTC CACGTGCTGG CCCAATCGGG GGAGGATGTC
ATTGCCTCGT GTACCCATTG TCAGTATGCG GCAAATTTAG AGAAGGCGTT TGGTATTGCG
GTGGATCTGG ATGGTGGTGT GCCCGAAGCC ATGGTGCGGG TGGCGACCCC TGGCCAAAAG
AGCATTGAAG AGGTTGCGGC CTTTTTGAAA ATGGATAAAG CGCGCACCGT TAAGTGCCTT
ACTTGGCACG ATCCAGAGGC CGATCAATGG TATTTGCTGC TGTTGCGGGG GGATCATACC
CTTAACGAAG TTAAGGCGTG TAATGCCACG GCACCGTTGG CGCAAATTCC CGCGCCAGAG
AAAGCCGTAG AAGCGTTGGG TGTGGCGGTG GGGTACCTGG GCGCAGTGGG GGCCGAGAAA
TTCAATAAAC CGGTTAAAAT TTTGGCCGAC AGTGCTCTGC GCGATGTTAC CAATATGGTG
TGTGGTGCCA ATGAAGAGGG GTACCATCTG ACCGGGGTCA ACTGGCAACG GGATCTGCCC
AAGCCTGAGT TTGTGGATCT GCGCAATGTG GAAGAGGGGG ATGGCTGTCC CCGCTGTGGC
CCGGGTAGTA TGGAGTTGAG TCGGGGTATT GAAGTGGGCC ATGTGTTTAA ATTGGGCTAC
AAATATTCCG AGGCCATGGG GGTCAAGGTG TTGGACGAGG ATGGCAAAGA GAAGCCCCTT
ATCATGGGCT GTTATGGCAT TGGTGTCTCC CGCATTGTGG CAGCGGCCAT TGAGCAGAAT
CATGATGAAA ATGGGATTAT CTGGCCCCTT GCCATTGCCC CGTTTGAGGT TGAAGTGGTG
GTGATGAACC CCAATGAGAG CGACGCCATG GAGAAGGCCG AAGAGATCAC CGCGCAGTTG
CAGGCCGGTC AGTTAGAGGT TCTACTGGAT GATCGCGATG AGCGGGCCGG TTCCAAGTTT
AAAGATGCCG ATCTGCTGGG AGCACCGTAT CGGGTGCTGG TGGGCGGGCG AGCCTTTAAA
GAGGGGGTTT GCGAAGTGAA AAACCGCCGC AGTGGAGTGG TGGAGAAGAT CCCTGTGGAG
TCGGTGGTGG AGACCCTATT GCAGTGGTTA GCCCAAGAAA AAAAGGCTTA G
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| Protein sequence | MRFSQTLIPT LKEEPSEAQV ISHKLMLRAG LIRQLGAGIY TWLPMGLKVL RKVETIVRQE
MDRAGAQEVL MPSIQPAELW EESGRWKMYG KELLRITDRH NRSFCYGPTH EEVISDLVRR
EIHSYKQLPA NFYQIQTKFR DEVRPRFGIM RGREFLMKDA YSFDIDEAAL DKSYRLMFEA
YNKIFNRLDL KFRPVEADTG AIGGASSHEF HVLAQSGEDV IASCTHCQYA ANLEKAFGIA
VDLDGGVPEA MVRVATPGQK SIEEVAAFLK MDKARTVKCL TWHDPEADQW YLLLLRGDHT
LNEVKACNAT APLAQIPAPE KAVEALGVAV GYLGAVGAEK FNKPVKILAD SALRDVTNMV
CGANEEGYHL TGVNWQRDLP KPEFVDLRNV EEGDGCPRCG PGSMELSRGI EVGHVFKLGY
KYSEAMGVKV LDEDGKEKPL IMGCYGIGVS RIVAAAIEQN HDENGIIWPL AIAPFEVEVV
VMNPNESDAM EKAEEITAQL QAGQLEVLLD DRDERAGSKF KDADLLGAPY RVLVGGRAFK
EGVCEVKNRR SGVVEKIPVE SVVETLLQWL AQEKKA
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