Gene Mmc1_1745 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1745 
Symbol 
ID4482061 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2156554 
End bp2157303 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content57% 
IMG OID639722487 
Productferredoxin 
Protein accessionYP_865659 
Protein GI117925042 
COG category[C] Energy production and conversion 
COG ID[COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0640464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATGATGA CGCCTGGAAA CGATCAGTGG ATCACCATTC ATTATGATGG CGAGCCTTAC 
AAGGTGCCGT CGGGTCGTAC CATCGTGACG GCGCTGGAGA CGGCTGGCGT TCGGTTTGTG
CGCAGCGTGG GGTGCCGTGG TGGTGTGTGC GGTGCCTGTA CGGCGTTTTA CCGTACCCCT
GCCGATGCAC AGTTAAAAAG CGCCTTGATG TGTCAGGAAC AAGTGGTGGA TGGCATGTCG
ATCATGCCCA TGCCCTTTTT CCCGCAAAAT CAAATGCCCT ACACCCTGAA CCTGCCTGCC
GGTGTGAGCC CGGCCCGGCA GGTTATGCAG CTCTACCCCG AGGTGGGGGG CTGCATTATG
TGTCAGGAGT GTACCCGCAT CTGTCCGGTT GGGATTGATG TGATGGGCTA TGTGGGCATG
ATCAAACGCG GTGATTTAAA GGCCGCTGCG GAGGCTTCTT TTACCTGTGT TCAGTGCCAA
GCGTGCGCGG TGCGCTGTCC TGCACGTATT TCGCAACCCA ATGCGGCGCT GGCAGCCCGA
CGTTTTTACG GTGCCCACGT GATGAACCGC GCCGACCATT TGCAAAAGGC GCGGGATAAA
GCGAAATCTC AAGAGATTCA GCGAGGATTT CGCCGTTTAA AGCGGATGGA TGCCGAGGAG
TTAAAAAATC TCTATCAGCG TCGAGAGGTG GAACCGGCTC AATCCGCGCC TGGCACTTGG
CTGCCTGAAG ATACCACTCT GCTGGGATAG
 
Protein sequence
MMMTPGNDQW ITIHYDGEPY KVPSGRTIVT ALETAGVRFV RSVGCRGGVC GACTAFYRTP 
ADAQLKSALM CQEQVVDGMS IMPMPFFPQN QMPYTLNLPA GVSPARQVMQ LYPEVGGCIM
CQECTRICPV GIDVMGYVGM IKRGDLKAAA EASFTCVQCQ ACAVRCPARI SQPNAALAAR
RFYGAHVMNR ADHLQKARDK AKSQEIQRGF RRLKRMDAEE LKNLYQRREV EPAQSAPGTW
LPEDTTLLG