Gene Mmc1_1648 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1648 
Symbol 
ID4484025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp2046120 
End bp2046794 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content50% 
IMG OID639722391 
Producthemerythrin HHE cation binding domain-containing protein 
Protein accessionYP_865563 
Protein GI117924946 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.371191 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.835393 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATTT TGGATTTAAC CCATAACCAC ACCATTGAGC AAGCTATGGC GCTCTTGCAA 
GCGGCTTTTG ATGCCTTGCC AGCGGGGGAA ACCATGGTGT TGTTGGGGGA GGATGCCCTC
ACCCCCTTGG TGGAACAATT TCAGGATGAA AATTGGGGTG CCTATGAGTG GTATCCCTTG
TCTGTACGTC GTGGTTGGCG GATCTCTTTG CATAAGCGTG CAGCGGTTAA AAGCCCGCGT
CAAGTGGCTG AATATTTTAC CTTTGATCAT CGTCGTTGTG ACGACCTTTA CGCAAAAATG
GAAAATGCTG CCGATGATGC ACCACGGGCT ATGGCCGCTT TTCAAGATTT TGATATGGGG
ATGCTGCACC ATTTTCGCAT GGAAGAGGAG GTCATTTTTC CCGCGTTTGA GCGTAAAACC
GGTATGACCC AAGGCCCAAC GATGATCATG CGTATGGAGC ACCAACAGAT GCGGGGATTG
CTGGCGCAAA TGCGCGAGTT TGTGTTGCAT GGCAATGTCC CCGGCATGAT CGGGGTAGGG
GGGACCCTGC TGTTTGTTAT GCAACAGCAC AATATGAAAG AGGAGCAAAT GCTCTACCCC
ATGACCGATA TGCACCTTGG TGATGAAGTG GACACCTTGA TTAAAGGGAG CCAGAAGCTG
AACCCCTTTA CCTAA
 
Protein sequence
MKILDLTHNH TIEQAMALLQ AAFDALPAGE TMVLLGEDAL TPLVEQFQDE NWGAYEWYPL 
SVRRGWRISL HKRAAVKSPR QVAEYFTFDH RRCDDLYAKM ENAADDAPRA MAAFQDFDMG
MLHHFRMEEE VIFPAFERKT GMTQGPTMIM RMEHQQMRGL LAQMREFVLH GNVPGMIGVG
GTLLFVMQQH NMKEEQMLYP MTDMHLGDEV DTLIKGSQKL NPFT