| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1647 |
|---|
| Symbol | |
|---|
| ID | 4484024 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 2044541 |
|---|
| End bp | 2045896 |
|---|
| Gene Length | 1356 bp |
|---|
| Protein Length | 451 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639722390 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_865562 |
|---|
| Protein GI | 117924945 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.605477 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAGAAAG CACCGCCTAC CATGTTTTTA AACAGTGGAC TGCATATAGA TCAAGCGCCA
CCGCTACATA TTCCTCTGCG ATTTTTTGCC ACCGCCCCCC TGTTTATGGT TATGACAGGG
CTGGCACTAA GCCTGTACGG CGCAGCGTTG CACGGGGATC AACTCGACCC CATCGCGGTC
GCCATCGTAC ACGGCATTAT GCTTGGTTGG CTGAATATGG TGATGTGGGG GGCCATGTAC
CAGATGATAC CCGTCTTAGC GGGCACGCGG GTCAAAGCCA TCTGGCTGGC TCAGCTGAGC
CATGCTTTAC TGGTGACGGG GCTATTGGCA CTTATGCTGG GGCTGCCCGA TTTTCTCCCT
TGGCGTGGCG CCCTACTCTT GACCGCATCG GTGCTGTTAC CCAGCGCATT TCTGCTGTTT
TTACTGCCCG TGGGCTGGGC CTTATGGCAC GCCCCCGCCA CCCACCCCAC GGTACATACC
ATGCGGCTTG CGCTGCTGGG ACTTAGCCTA ACCCTGTTGC TTGGTCTACT CTTTCTATTG
GAGCACCAGT TTGGATTTTT AGCCATGGAT CGCCAACAGA TGGTGACGAT TCATGCCAGT
TGGGCACTGT TTGGTTGGGT TGGCTTGCTG ATTATAGGGG TCTCTTTCCA GGTGCTACCC
ATGTTTTATA TGATGCCCGC CTTCCCAACC ACCCAGGCAA AACAGATTGT TTTATTGTGG
CTGACGACCC CCACGGCCCT CACCCTTGCG CTAATGTTTG GGCAAGATCT GCAATTAATC
CTGTTAGCCT TAGTTCCCCT CTATGGGGGG GCGGCCCTCT ATGGCTTACA CATAGCCCGT
TTAATCCAAC AACGTAAACG CAAGCTGTGG GATGCCACCC TGCGGTTTTG GCTATTGGGG
TTTGCTTGCG GCACCCTAGC CTTACTGGGT CTACCCCTCG CCATTCTCTT GCAAACGGAT
CTCATGGCAC CCGTGGTTGT GCTGTTTAGT ATGGGCTTTG CGGGTTCCAT CATTTTTGGC
ATGCTCTACA AGATCATCCC ATTTTTGGTA TGGTTTCATC GTTTTAGCCG CTTAGCAGGC
TTAGCCCCCA TCCCCATGAT GGAAGATCTG GTACCCGACC GCTTGGCCCG CACCCATAGT
TGGGTGCATG GTGCCACCCT GATCGCTCTG AGCCTAGGCT GGTATCAATT TGGCGGGGTT
CTGCTCATAC TCTCAGGGCT CTTTATTGTG GTGGCATTGT GGCATGCCTT AACGCAGCCT
GTACCGTCAC TGCCCCAAGT TAATGGTATG GAAGATTTTG CTAAAATGTT TGAAAACTTG
AACAAACCAA GCGCCCCGCC CCCACCGCAA ACCTAA
|
|---|
| Protein sequence | MKKAPPTMFL NSGLHIDQAP PLHIPLRFFA TAPLFMVMTG LALSLYGAAL HGDQLDPIAV
AIVHGIMLGW LNMVMWGAMY QMIPVLAGTR VKAIWLAQLS HALLVTGLLA LMLGLPDFLP
WRGALLLTAS VLLPSAFLLF LLPVGWALWH APATHPTVHT MRLALLGLSL TLLLGLLFLL
EHQFGFLAMD RQQMVTIHAS WALFGWVGLL IIGVSFQVLP MFYMMPAFPT TQAKQIVLLW
LTTPTALTLA LMFGQDLQLI LLALVPLYGG AALYGLHIAR LIQQRKRKLW DATLRFWLLG
FACGTLALLG LPLAILLQTD LMAPVVVLFS MGFAGSIIFG MLYKIIPFLV WFHRFSRLAG
LAPIPMMEDL VPDRLARTHS WVHGATLIAL SLGWYQFGGV LLILSGLFIV VALWHALTQP
VPSLPQVNGM EDFAKMFENL NKPSAPPPPQ T
|
|---|
| |