| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1611 |
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| Symbol | |
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| ID | 4480872 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1992908 |
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| End bp | 1995172 |
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| Gene Length | 2265 bp |
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| Protein Length | 754 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722353 |
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| Product | DNA topoisomerase IV subunit A |
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| Protein accession | YP_865526 |
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| Protein GI | 117924909 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01062] DNA topoisomerase IV, A subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAATA CCTTTGAACA GATCGATCCA TGTAACCTGC GTGAGGAGCT GGAGAGCCGC
TATCTGGCTT ATGCCCTCTC CACCATTATC AGCCGTTCCC TGCCCGATGT GCGGGATGGC
TTAAAACCGG TACATCGGCG CATTCTATTT GCCATGCGCG CGCTACGCCT GGACCCCAAC
AGCCCCTATA AAAAATCGGC ACGGGTGGTG GGGGATGTGA TCGGTAAATA TCACCCCCAC
GGTGACCAAG CTGCTTACGA CGCCATGGTG CGGTTGGCGC AAGAGTTTGC GGTGCGCTAT
CCCTTGGTGG ATGGGCAGGG CAACTTTGGC AATATTGATG GCGATAGCGC CGCTGCCATG
CGCTATACCG AAGCCCGCCT GACCAGTGTG GCCAAAGCGC TGCTGGAAGA TTTGGAGATG
GATACGGTGG ACTTTATGCC CACCTATGAT GGCTCCATGG AAGAGCCGGT GGTGCTGCCG
GCCCGTTTCC CCAACCTGCT GGCCAACGGC TCATCGGGCA TTGCGGTGGG CATGTCTACC
AATGTGCCCC CCCATAATGT GGGGGAGATT CTGGACGCCT GCCTGCTGCT TATCAGCAAA
CCAAATTGTA GCATTGAAGA GCTCATGCAA CACCTGCCCG CCCCCGATTT TCCCACCGGC
GGCATTTTGA TGGCCGATCA TGCTGAACGG TTGGAGGTCT ACAGCGAAGG GCGGGGGAGT
CTACGTCTGC GGGCACGCTG GGCGGTGGAG GATCTGGGGC GGGGTTTGTG GCAGATCGTG
GTGACGGAAA TTCCTTATCA GGTGCAAAAA TCTCGCCTGA TTGAGCGCAT CGCGCAACTG
GTTATCGACC GAAAATGTCC CTTTTTAACC AATGTGCGGG ATGAGTCTGA CGAAAATCTG
CGTATTGTGC TGGAGCCTCG CGCCCGCACG CTGGACCCTG AATTAATCAT GCATTTTTTG
TTTAAACATT CGGATCTGGA ATCCCGCGCC AGCTTTAACC TAAACGTGAT TGTGGGGGGG
CACCGGCCCG AGGTGTTGGA CCTTAAAGGC ATCCTGCGCC ACTGGTTGGA CCACCGCTTT
GTGGTACATA CCCGCCGGGC CAGTTATGAA CTGAAAAAAA TCCGTGAGCG GTTGCACCTG
TTACAGGCGT TCCTCATCGT CCATCTGAAT ATTGATGAGG TGATCGAGAT CATCAAAAAG
AATGATGATC CCGCACCGGT GTTGATGGCG CGTTTTTCCC TGGATGAGAT TCAGGCCGAG
GCGATTCTGA ACATGCGTTT GCGCAATTTG CGCAAGCTTG AAGAGATGAA AATTCGGAAG
GAGATGGAGG AGTTGCAGGC CCGAGCCGAC CTGCTGGAGG CGATGTTGGC CGATGATAAA
ATCATGTGGA AAGCGATTCG TGACGAACTA AAAGCGACCC GCAAAGAGTT TGCCGATGTG
CGCCGCACCG AGATTTGTGG CTCGGTAGAG GATGTGCATG TGCGCCCCGA AGATTTTGTG
GAGAAAGAGC CCATCTCGGT CATCCTCTCC CAAATGGGTT GGGTTAAAGC CAACAAAGGC
CACGATGTAA ACACCGAGGT GCTGCGCTTT AAAGGGGATG ATCTGCTGCT GCGATCTTTC
CCCTGCTACA CCAATCAGTC GGTCTCGTTT ATTAGCCAGA GCGGCAAGCT GTTTACCATT
TTGGCCAGCA ACCTGCCCGC AGGCAAAGGG TTTGGTGAAC CGTTGACCAG TATGTTTGAT
CTGGATGGGG GGGATCGGGT GCTGTGGGCG TTGCCGGTGG ATCCAGAACA GGAGTATCTG
CTGATTACCC GTCTGGGCCA GGGTTTCCGC GTTAAAGGGG TGGATCTCAT CGCCAACCAG
CGCAAAGGCA AACAGTTGAT TACCCTCAAA AGTGGCGACC AACCGCTGCA TCTGCACCCA
GTTAAGGGTC CTTGGGTGGG CTCCATCAGC CGCAGTCGCC GCTTGTTGAT CTTCCCCATT
GAACAATTCC CCTTGATGGC CAAAGGCAAA GGGGTGCGGG TGCAAAAATT GGGTGCGGAT
GAGGTGGTGG TGGATGTCAC CACCTTTACC GATGAAGAGG GCTTTGTGTT GGATTCGGGC
AAAAAGACCA AACATGTCAC CGATTATGAT CAGTGGCATG GCAACCGCGC CGGACGGGGC
GCGATGCTGC CCCACGGCTT TTTGAGCGGG GCGGTGTTCG CCGGTACTGG GGCCTCGCCG
CTGAAGGCGG GTAAGGGACT GACAGGTGAA CTGTTTGACG ACTGA
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| Protein sequence | MSNTFEQIDP CNLREELESR YLAYALSTII SRSLPDVRDG LKPVHRRILF AMRALRLDPN
SPYKKSARVV GDVIGKYHPH GDQAAYDAMV RLAQEFAVRY PLVDGQGNFG NIDGDSAAAM
RYTEARLTSV AKALLEDLEM DTVDFMPTYD GSMEEPVVLP ARFPNLLANG SSGIAVGMST
NVPPHNVGEI LDACLLLISK PNCSIEELMQ HLPAPDFPTG GILMADHAER LEVYSEGRGS
LRLRARWAVE DLGRGLWQIV VTEIPYQVQK SRLIERIAQL VIDRKCPFLT NVRDESDENL
RIVLEPRART LDPELIMHFL FKHSDLESRA SFNLNVIVGG HRPEVLDLKG ILRHWLDHRF
VVHTRRASYE LKKIRERLHL LQAFLIVHLN IDEVIEIIKK NDDPAPVLMA RFSLDEIQAE
AILNMRLRNL RKLEEMKIRK EMEELQARAD LLEAMLADDK IMWKAIRDEL KATRKEFADV
RRTEICGSVE DVHVRPEDFV EKEPISVILS QMGWVKANKG HDVNTEVLRF KGDDLLLRSF
PCYTNQSVSF ISQSGKLFTI LASNLPAGKG FGEPLTSMFD LDGGDRVLWA LPVDPEQEYL
LITRLGQGFR VKGVDLIANQ RKGKQLITLK SGDQPLHLHP VKGPWVGSIS RSRRLLIFPI
EQFPLMAKGK GVRVQKLGAD EVVVDVTTFT DEEGFVLDSG KKTKHVTDYD QWHGNRAGRG
AMLPHGFLSG AVFAGTGASP LKAGKGLTGE LFDD
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