| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1581 |
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| Symbol | |
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| ID | 4482006 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1947415 |
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| End bp | 1950822 |
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| Gene Length | 3408 bp |
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| Protein Length | 1135 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639722323 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_865496 |
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| Protein GI | 117924879 |
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| COG category | [C] Energy production and conversion
[E] Amino acid transport and metabolism |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing
[COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
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| TIGRFAM ID | [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.863454 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTCAAT CGCCTCTGCA AACCTCTTCC TCCCAATCCC GTGATGGTAT GTGTGGTATC
TGCCCCGCTG GGTGTTGGGT GCGGGTCCAC TATGCGGGTG AAACCATGGT GGCGGTAGAG
CCCAGACCCG ACCATCCCCT GGGTATGATC TGTCGTATCG GGCGTAAATC CCCCAATATT
GTTTATGATC CCCAACGTTT GCAAACCCCC CTTAAACGGG TTGGCCCCAA GGGCAGTTAT
GCGTTTGAAC CCATCTCCTG GGATGAGGCG ATGGCCACCA TCGCCAGCCG CTTACAACAG
ACTAAAGCCC AACATGGTGC CGAAGCCACC GCCATCTATA CCGGTCGGGG CAGCTTTGAT
ATGGCCATGT GCGACCTGTT TCAACCGGCG GATGTGGCGG TCTCTTCGGC CAGCAGTGTG
CTGTTTCCCT TTGGCTCGCC CAACACCCTA GGGGTGGGGG CGCTCTGTTA TGTCTCTTTT
GCCATGATCG CCCCCCATGT CACCTTTGGG GAGATGCTCA TCAGCCTAGA GACCGACCTG
CCCCAATCTG AACTTATTGT CCTATGGGGA GCCAATCCCG CCACCGACTC CCCCCCCATG
GCCCATGGGC AGATTTTGGC GGCCAAACAG CGGGGGGCCG AGGTGTTGGT GATCGACCCG
CGCCGCTCCG AAAGCTGTGT CGAGGCCGAT GCCCAGTGGT ACCCCATCCG CCCTGGTACC
GATGGTGCCT TGGCTCTGGG CATGATCCAT GTGCTCATCG AAGAGGAACT CTACGATGAA
AACTTTGTGA AAAATTGGAC ACTAGGGTTT GAGGAGCTTG CGCAATATGT GCAGCACTTT
CACCCGGATG TGGTGGCCGA AATCACCGGC GTGCCCGCTG AACAGGTGCG CAACATCGCC
CGTAAAATTG CCAACGCGGC AGGAGCCTGC CCGGTGATGT ATACCGGCTT GGAGTATTCC
GACAGTGGTG TGCAGGCGAT CCGCGCAGTG TTTACCCTAT GGGCGCTGGC CGGTCAGCTG
GATGTACCCG GGGGGCTGCT GATCCGCATG AAGGAGAACC AGTTTCCGCA AAATCGCACA
CACCTGATTA AAAACCCCGG GGCGGATAAA GCCCTTGGGC GGGACCGTTT TCCGGTCTAT
TCGGCCTATC GGGGCGAATC CCACGCCATT GCACTGCCCC AATCGGTGCT GCAAGGTACC
CCCTATAAGG TGCGCGATCT GATTGTCTTG GGGGGATCGT TGATCACCTC CTGGCCCGAT
CCGGAATTGT GGAAACGTAC CCTGAACGCA CTGGAGTTTT TGGTGGTGAT CGACCGCTAC
CACACCGCCG ATTCGGCCTA TGCCGATATT GTACTACCTG CTACCACCCT CTATGAGTGC
CGCTCCTTTA TGCGCTATGG ACCAATGTTC GCCATACGGG AAAAGTTGGT ACCGCCGGTG
GGCGAGGCGC GGAATGATTT TCTTATCCTA GCGGAACTGG CGCAGCGTTT GGGCTATGGG
CACCTCTACC CCCAAACTGA AGCGGCAATC TTAGAACGGG CGCTGGAGGG CAGCGGCTTT
ACCTTAGAGC AGGTGCAGGC AGCCGGTGGG GTGGTGCAGC TTGAGAGCCA GATGATGCAG
TATAAAAAAT GGGAAAAGGG GCGGCTGCGG GAGGATGGTA AACCCGGTTT TGCCACCCCA
AGCGGAAAGT TTGAGATCGC CTCTTCCCTA TTGGTCGAGC ATGGCTACGA CGCTTTGCCC
GTCTACACAG AGCCCCAGGA GGGGCCGTTG GCGCGTCCCG ATCTGGCCCG CCACTTTCCC
TTGGTGCTGA ACACCGGTGC CCGCACCTAT TACGATTTTC GCAGTCAGCA CCATGGGGTT
AAGGGCTTGG CCGAGCAACA GCCCGACCCT AGGGTGACCA TGAACCACGA AGATGCCGCC
CAACGGGGCA TCCAAAATGG GGATTGGGTA TGGGTGAGCA GCCCCCGTGG TGAGGTGAAA
TACCGAGCCC GTGTTACCGA TGCGATTGTA AAGGGGAGTG TGGATGCCAA CATGGGCGGG
GGTGGGCCGG TGGGTCCAGC GCCGTGGCAG GCTTGCAATG TGAATGCCTT GACCGATCCT
GAACACTACG ATCCCATTTC CGGCTTTCCC ATCTACAAAA CCTTGCTCTG CCAAATCCGT
AAAGCGGCTG ATGCAGATGC CCAGTTTATG GAGATTGAGG AGCCTGACCG TGGGCCAACC
TTGGCGGACA CCCCTGGCGT ACAGCAGGTG ATCTATCTGG ACCACAACGC CACCACCCCC
ATGGATGAGA CAGTGATTGC GGCCATGCGC CCCTATCTGG AAAGCGCCTT TGGCAACCCC
TCCAGCATTC ACGGTTTGGG AGTCAAGGCA CGCCATGGTG TCGAAGCGGC CCGCCGTCAG
GTGGCGCAAC TGTTGGGCTC TACGGCTCGC CGTATTATTT TTACCGGTGG GGGTTCCGAG
GCAGATAATC TGGCGCTGCG GGGGGTGGTG GCTCGCTACC CTGGTCAATC CTGCCATATC
ATTACCAGTG CGGTGGAACA TCCCGCGATT TTGGCCTGCT GCGCCGCGCT GGCGCGGCAG
GGTCACCGGA TTACCTATCT GCCAGTGGAT GCCCAAGGGG TGGTCAATCA GGACGCCTAT
GTGGACGCCT TAACCCCCCA GACCACGCTG GTCTCCATTA TGGCCGCCAA TAATGAGACC
GGCACGCTGC AACCCATCCA GGCCATGGCG GCCCAGGCCC GCGCCATGGG GGTGCTGTTT
CACAGCGATG GGGTGCAGGC GCTGGGTAAA ATCCCCCTTA ACGTGGATGA TCTGGGGGTG
GATCTGCTCT CCCTATCCGC CCATAAAATC CATGGTCCCA AAGGGGTAGG GGCGCTCTAT
CTGCGTAAGG GGGTGGAGAT CGAACCCCTC ATCGCAGGGG GGAGCCAAGA GTGGGGCTTG
CGGGCAGGAA CCGAGAATGT AGCAGGGATC GTGGGCTTTG GTAAGGCGTG TGAGCGGGCC
GACCACGCCC TGCGCCATGG CGAGGCCCAG CGGCTGGCGC AACTGCGGGA TCGGCTGGAG
GATGGCTTGC TGGCGTTGGT GCCCGGTGCC AAACGCAATG GCCCCCCACA CAATCGCCTG
CCCAATACGC TTAATCTAAC CCTGCCGGGC ATCCGGGGCG AGTCGTTGGT GTTGGTCATG
GAGCGGCAGG GTGTCTATTT CTCTTCGGGT TCAGCCTGCA AGTCGGGCAA TCCCGACCCC
TCCCATGCAC TGTTGGCCAT GGGGATCTCC CCCGCCGATG CCCACTGTTC GGTGCGCTTT
TCGCTAGGCT CTGGAACGAC CCTCGCTCAG CTGGAACGGC TGCTGGCGCT GTTTAAGGAG
ACCCTCGCCG ACACCATGGG TAGCATCCGC TTTGTCAGTT GTCGATAG
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| Protein sequence | MSQSPLQTSS SQSRDGMCGI CPAGCWVRVH YAGETMVAVE PRPDHPLGMI CRIGRKSPNI
VYDPQRLQTP LKRVGPKGSY AFEPISWDEA MATIASRLQQ TKAQHGAEAT AIYTGRGSFD
MAMCDLFQPA DVAVSSASSV LFPFGSPNTL GVGALCYVSF AMIAPHVTFG EMLISLETDL
PQSELIVLWG ANPATDSPPM AHGQILAAKQ RGAEVLVIDP RRSESCVEAD AQWYPIRPGT
DGALALGMIH VLIEEELYDE NFVKNWTLGF EELAQYVQHF HPDVVAEITG VPAEQVRNIA
RKIANAAGAC PVMYTGLEYS DSGVQAIRAV FTLWALAGQL DVPGGLLIRM KENQFPQNRT
HLIKNPGADK ALGRDRFPVY SAYRGESHAI ALPQSVLQGT PYKVRDLIVL GGSLITSWPD
PELWKRTLNA LEFLVVIDRY HTADSAYADI VLPATTLYEC RSFMRYGPMF AIREKLVPPV
GEARNDFLIL AELAQRLGYG HLYPQTEAAI LERALEGSGF TLEQVQAAGG VVQLESQMMQ
YKKWEKGRLR EDGKPGFATP SGKFEIASSL LVEHGYDALP VYTEPQEGPL ARPDLARHFP
LVLNTGARTY YDFRSQHHGV KGLAEQQPDP RVTMNHEDAA QRGIQNGDWV WVSSPRGEVK
YRARVTDAIV KGSVDANMGG GGPVGPAPWQ ACNVNALTDP EHYDPISGFP IYKTLLCQIR
KAADADAQFM EIEEPDRGPT LADTPGVQQV IYLDHNATTP MDETVIAAMR PYLESAFGNP
SSIHGLGVKA RHGVEAARRQ VAQLLGSTAR RIIFTGGGSE ADNLALRGVV ARYPGQSCHI
ITSAVEHPAI LACCAALARQ GHRITYLPVD AQGVVNQDAY VDALTPQTTL VSIMAANNET
GTLQPIQAMA AQARAMGVLF HSDGVQALGK IPLNVDDLGV DLLSLSAHKI HGPKGVGALY
LRKGVEIEPL IAGGSQEWGL RAGTENVAGI VGFGKACERA DHALRHGEAQ RLAQLRDRLE
DGLLALVPGA KRNGPPHNRL PNTLNLTLPG IRGESLVLVM ERQGVYFSSG SACKSGNPDP
SHALLAMGIS PADAHCSVRF SLGSGTTLAQ LERLLALFKE TLADTMGSIR FVSCR
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