Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1573 |
Symbol | |
ID | 4481998 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1937723 |
End bp | 1938826 |
Gene Length | 1104 bp |
Protein Length | 367 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639722315 |
Product | HflK protein |
Protein accession | YP_865488 |
Protein GI | 117924871 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | [TIGR01933] HflK protein |
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Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.000000427817 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCCTGGA ACGGAAACGG TGGCGACCAA GGCCCATGGG GTCAACGTCC CAACAATCCG CAACAGCCCG ACCTGGAGCA GATACTGCGT GCCGCTAAAG ATCGTTTTGG TGGTGGCAAT CTCCCGGGTG GAAAACTCAG TCTAATCTTT ATCTTGGGGG TTGTCCTGGT GGGGTGGTTT GCCACCGGAA TCTATACCGT GGGCCCCAAT GAGCAGGCGG TGGTGGTGCG TTTTGGGAAA TATGTTGAGA CAACAGGTCC CGGTGTAAAC ATGCACCTAC CCTGGCCCAT CGAAAGTGTG GAAGGAAAGC CTAAAGTTCT GCAAAACCAG CGCATTGAGA TTGGTTTTCG CTCTAATGGC AGCCGTGAGA TCGACGTGCC GGCAGAGTCT AAAATGTTGA CCGGTGATGA GAACATTATC GATATCAACA TGTCGGTGCA GTTTAAAATC AAGGATGCAG CGGATTCGCT GTTTCAGGTT TCGGATGTGG TCAGCGGTAC GCGGGGACGG GAGATTCGTG ATCCTTCGCT GCTGATCCGG CAAGCCTCGG AAACCGCACT GCGTGAGGTG GTGGGTAAAA ACAAGATTGA TGAAGCTCTA ACCAGTGGTA AGGAGCAGAT TGAGACGCAA ACACGGGAAC TTGTTCAAGA AATCTTGGAT AGCTACCGCT CGGGTTATCA GATTGAGGGG GTGCAGTTGC AGCAGGTACA GCCCCCTGAA GAGGTGATTG ACGCCTTTAA AGATGTGGCC AGTGCACGCG AGGATAAAGT GCGTAAGGTC AACGAAGCGC AAGGGTACAG TGCGGATATT CTACCCAAGG CGATGGGTAC TTCGGCCCAG TTGATCAACG AGGCCGAAGC TTACAAGCAG TCCAAGGTGG CGCGGGCGCG TGGTGATGTT GAGCGCTTTA ACAACCTCTA TGTCGAGTAT AAAAAGGCCA AGGACATAAC CCGTACGCGT CTCTATCTTG AGACCATGGA AGAGGTTATG GCGCGGGCCA ATAAAGTGAT CATCTCTCCT GAAGCCGGGC GAGGGGTATT ACCGCATCTC CCCCTGGATT CACGCATTTT TGGCAGCGGC AAAACACCGC AGCAGCAGCC TTGA
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Protein sequence | MSWNGNGGDQ GPWGQRPNNP QQPDLEQILR AAKDRFGGGN LPGGKLSLIF ILGVVLVGWF ATGIYTVGPN EQAVVVRFGK YVETTGPGVN MHLPWPIESV EGKPKVLQNQ RIEIGFRSNG SREIDVPAES KMLTGDENII DINMSVQFKI KDAADSLFQV SDVVSGTRGR EIRDPSLLIR QASETALREV VGKNKIDEAL TSGKEQIETQ TRELVQEILD SYRSGYQIEG VQLQQVQPPE EVIDAFKDVA SAREDKVRKV NEAQGYSADI LPKAMGTSAQ LINEAEAYKQ SKVARARGDV ERFNNLYVEY KKAKDITRTR LYLETMEEVM ARANKVIISP EAGRGVLPHL PLDSRIFGSG KTPQQQP
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