| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1571 |
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| Symbol | |
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| ID | 4484189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 1936154 |
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| End bp | 1936930 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639722313 |
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| Product | tRNA/rRNA methyltransferase (SpoU) |
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| Protein accession | YP_865486 |
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| Protein GI | 117924869 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0565] rRNA methylase |
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| TIGRFAM ID | [TIGR00050] RNA methyltransferase, TrmH family, group 1 |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.0152101 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGTTGAAA ATCGCATGAA TGAACCATTA TCCGGTCCGG TGTTTATTTT GGATCACCCC
TCCCACGGGG GAAATGTAGG TGCCGCATTG CGGGCGATCA CCAATATGGG GTTTGAGCAT
TTGCGTTTGG TCAGACCACG ATTTTTTCCC CATCCTGACG TGGAGGCTTG GGCGGCGGGT
ACCGCTGCGC GCATCCCAAC CATTCAGGTG TTTGATTCGT TGGATGCGGC CACGGCCGAT
CTTAACCATC TGGTCGCCGT CACCCGGCGG GGACGTGGGC AACGGCATCA AGTCATGAGC
CCTCGTGAGT TAGGGGTGCG CTTAGACCCA AAACAGCAGC TTGCCAGTAG CCGGGTGGGC
ATTTTATTTG GCACCGAACG TACCGGTCTG GAAACAGCGG ATGTGGAGCG GTGCCACTGG
ATCTGCACCA TCCCCACCCA TGGGGAGAAG GGCTCCTTAA ATCTTTCGCA GGCGGTGATG
TTGGTCGCCT ATGAATTGAT GCTTGGGCAG GGGCTAGGGG AGGTTCCTGT GCACGATCCG
CAGCGGGATG ATGCCTTGGC AAGCCAAGAT GAGATGGTGC GGTTTTTTGA CCATTTGCAG
GATGTTTTGA TGCAGATCGA CTTTATCCAA CCGGACCGCT ACAAACAGAT GATGGGTACC
CTCAAGGCGC TCTTTAACCG AGCGGCGCTG GATCGCCGAG AAATCACCAT TCTACGGGGT
ATACTTACAG AGGTTATCCA CCATTGCGCA CGCAAGATTT CGGCTCTGCA ACGTTAA
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| Protein sequence | MVENRMNEPL SGPVFILDHP SHGGNVGAAL RAITNMGFEH LRLVRPRFFP HPDVEAWAAG
TAARIPTIQV FDSLDAATAD LNHLVAVTRR GRGQRHQVMS PRELGVRLDP KQQLASSRVG
ILFGTERTGL ETADVERCHW ICTIPTHGEK GSLNLSQAVM LVAYELMLGQ GLGEVPVHDP
QRDDALASQD EMVRFFDHLQ DVLMQIDFIQ PDRYKQMMGT LKALFNRAAL DRREITILRG
ILTEVIHHCA RKISALQR
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