Gene Mmc1_1556 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1556 
Symbol 
ID4484174 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1916321 
End bp1917097 
Gene Length777 bp 
Protein Length258 aa 
Translation table11 
GC content54% 
IMG OID639722298 
Producthypothetical protein 
Protein accessionYP_865471 
Protein GI117924854 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.285597 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACAGC TCTTTATCCC TTTTATGGCG GCTTTGCTGG GCGGCTGGCT GGTGACCGTG 
GCAGGGGCTG CGGAGCCTGC TCCAGGGGCC GCGATGGGCG AGTCCCTACA GTATAATATC
CACTGGACGG GTCTGCCCGG TGGAAGCTCC ACACTCTCTT TGCAGGGCAA CCCCCAGGGC
TATACCATTG AGGTGGCTTT AAAATCCATC GGTATGGTGG CCTTTTTCTA CCCCGTCAAA
GATTTTGTGC GGGTTGAAGG GATACAGCAA AAGCAGGCGT ATCTGGCTAA AAGTTACCTT
AAAAATCAAG ATGAAGGTGG CAAAAGACGC ACGACGCTGG TAACGTTTAA TCGGGCAAAA
CAACAAGCGG TACAGGCACG TAATAAAGAG CCCCCCAAAA CCATCACAGA TCTGCCTGGG
GATGTAACCG ACCCGCTTTC GGCCTTTTAC GCCTTTCGCG CCATCCCCGA TCTCATCCCG
GGTGCCCACC ATTTGATCCC GGTGTTGGAT AGCCATAAAA GCTATGTCGC GCGCATTGAT
ATCATCAAAA AAGAGCGCCT AAACACACCG CTAGGTTGGT TCGATACGGT GTTGGTGCAT
ACTCACCTGA AGAGCTCGGA AATTTTTCGT CAAAAAGCGC CGATAAAAAT TTGGTTCAGC
GACGATATCC GCCGCCTGCC GGTGCGGGTG GAGACCAGCA TCCCCATCGG CTTTGTGGCC
GCCGATCTGG TGGCTTACCA GGATGGCCGG GGCGCTTCGC AAGAGATTGC CCATTAA
 
Protein sequence
MKQLFIPFMA ALLGGWLVTV AGAAEPAPGA AMGESLQYNI HWTGLPGGSS TLSLQGNPQG 
YTIEVALKSI GMVAFFYPVK DFVRVEGIQQ KQAYLAKSYL KNQDEGGKRR TTLVTFNRAK
QQAVQARNKE PPKTITDLPG DVTDPLSAFY AFRAIPDLIP GAHHLIPVLD SHKSYVARID
IIKKERLNTP LGWFDTVLVH THLKSSEIFR QKAPIKIWFS DDIRRLPVRV ETSIPIGFVA
ADLVAYQDGR GASQEIAH