Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1556 |
Symbol | |
ID | 4484174 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1916321 |
End bp | 1917097 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639722298 |
Product | hypothetical protein |
Protein accession | YP_865471 |
Protein GI | 117924854 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.285597 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 20 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACAGC TCTTTATCCC TTTTATGGCG GCTTTGCTGG GCGGCTGGCT GGTGACCGTG GCAGGGGCTG CGGAGCCTGC TCCAGGGGCC GCGATGGGCG AGTCCCTACA GTATAATATC CACTGGACGG GTCTGCCCGG TGGAAGCTCC ACACTCTCTT TGCAGGGCAA CCCCCAGGGC TATACCATTG AGGTGGCTTT AAAATCCATC GGTATGGTGG CCTTTTTCTA CCCCGTCAAA GATTTTGTGC GGGTTGAAGG GATACAGCAA AAGCAGGCGT ATCTGGCTAA AAGTTACCTT AAAAATCAAG ATGAAGGTGG CAAAAGACGC ACGACGCTGG TAACGTTTAA TCGGGCAAAA CAACAAGCGG TACAGGCACG TAATAAAGAG CCCCCCAAAA CCATCACAGA TCTGCCTGGG GATGTAACCG ACCCGCTTTC GGCCTTTTAC GCCTTTCGCG CCATCCCCGA TCTCATCCCG GGTGCCCACC ATTTGATCCC GGTGTTGGAT AGCCATAAAA GCTATGTCGC GCGCATTGAT ATCATCAAAA AAGAGCGCCT AAACACACCG CTAGGTTGGT TCGATACGGT GTTGGTGCAT ACTCACCTGA AGAGCTCGGA AATTTTTCGT CAAAAAGCGC CGATAAAAAT TTGGTTCAGC GACGATATCC GCCGCCTGCC GGTGCGGGTG GAGACCAGCA TCCCCATCGG CTTTGTGGCC GCCGATCTGG TGGCTTACCA GGATGGCCGG GGCGCTTCGC AAGAGATTGC CCATTAA
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Protein sequence | MKQLFIPFMA ALLGGWLVTV AGAAEPAPGA AMGESLQYNI HWTGLPGGSS TLSLQGNPQG YTIEVALKSI GMVAFFYPVK DFVRVEGIQQ KQAYLAKSYL KNQDEGGKRR TTLVTFNRAK QQAVQARNKE PPKTITDLPG DVTDPLSAFY AFRAIPDLIP GAHHLIPVLD SHKSYVARID IIKKERLNTP LGWFDTVLVH THLKSSEIFR QKAPIKIWFS DDIRRLPVRV ETSIPIGFVA ADLVAYQDGR GASQEIAH
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