Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_1543 |
Symbol | |
ID | 4483139 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | + |
Start bp | 1900635 |
End bp | 1901285 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639722285 |
Product | rhodanese domain-containing protein |
Protein accession | YP_865458 |
Protein GI | 117924841 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0607] Rhodanese-related sulfurtransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.219792 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTTTAT GTGTGGCCCT AACGGCCCTA ACGGCCATAG CGGGGGATGG TGAAGAAGGG GGGGCGGGCA ATACGGCCCC TCTGGAGGTT AATATAACTC GCACGGTAGG GTCGTTTGAG GTCAAGCATG GCCGTGGCAT GGTTCAGGTG ATCCGCAATC AGGATCCCAA CGGCGTTATT GATGAGGGGT TTGATAAAAC TTCCCGCAAA TGCCCCCCCT TCTGTGCGGT GCCCATGACG GTAGCCGATG GGGTGCGGAC CATTGGTGAG GTGGAGTTGA TGGAATTTAT GACCACCCAT TTGGCCGATG GCAGCGGGGT GTTGGTGGAT GCCCGCTCCC CAGACTGGCA CGCCAAAGGG ACCATTCCAG GCTCCATCAA TGTACCCTAT ATTGAGGTGT CTCCTCAACT TGGCGCCGAT GAGCTCTCTA TTGAAGCGGC GTTGTCCCAT TTTGGGGTGG TGGATAAAGA TTTTTCCAAG GCCAAGTATC TGGTGCTTTG GTGCAATGGT CCTTGGTGTG GCCAATCGCC CACAGCGATC CGTGGCTTAA TTGAGCTTGG TTATCCCAAA GAAAAATTGC TCTATTACCG GGGTGGCATG CAACTGTGGA AAATATTTGG TCTGCCGGTG GTGCCCCCTG CTGCGGAATA G
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Protein sequence | MALCVALTAL TAIAGDGEEG GAGNTAPLEV NITRTVGSFE VKHGRGMVQV IRNQDPNGVI DEGFDKTSRK CPPFCAVPMT VADGVRTIGE VELMEFMTTH LADGSGVLVD ARSPDWHAKG TIPGSINVPY IEVSPQLGAD ELSIEAALSH FGVVDKDFSK AKYLVLWCNG PWCGQSPTAI RGLIELGYPK EKLLYYRGGM QLWKIFGLPV VPPAAE
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