Gene Mmc1_1543 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1543 
Symbol 
ID4483139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1900635 
End bp1901285 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content55% 
IMG OID639722285 
Productrhodanese domain-containing protein 
Protein accessionYP_865458 
Protein GI117924841 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0607] Rhodanese-related sulfurtransferase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.219792 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTTTAT GTGTGGCCCT AACGGCCCTA ACGGCCATAG CGGGGGATGG TGAAGAAGGG 
GGGGCGGGCA ATACGGCCCC TCTGGAGGTT AATATAACTC GCACGGTAGG GTCGTTTGAG
GTCAAGCATG GCCGTGGCAT GGTTCAGGTG ATCCGCAATC AGGATCCCAA CGGCGTTATT
GATGAGGGGT TTGATAAAAC TTCCCGCAAA TGCCCCCCCT TCTGTGCGGT GCCCATGACG
GTAGCCGATG GGGTGCGGAC CATTGGTGAG GTGGAGTTGA TGGAATTTAT GACCACCCAT
TTGGCCGATG GCAGCGGGGT GTTGGTGGAT GCCCGCTCCC CAGACTGGCA CGCCAAAGGG
ACCATTCCAG GCTCCATCAA TGTACCCTAT ATTGAGGTGT CTCCTCAACT TGGCGCCGAT
GAGCTCTCTA TTGAAGCGGC GTTGTCCCAT TTTGGGGTGG TGGATAAAGA TTTTTCCAAG
GCCAAGTATC TGGTGCTTTG GTGCAATGGT CCTTGGTGTG GCCAATCGCC CACAGCGATC
CGTGGCTTAA TTGAGCTTGG TTATCCCAAA GAAAAATTGC TCTATTACCG GGGTGGCATG
CAACTGTGGA AAATATTTGG TCTGCCGGTG GTGCCCCCTG CTGCGGAATA G
 
Protein sequence
MALCVALTAL TAIAGDGEEG GAGNTAPLEV NITRTVGSFE VKHGRGMVQV IRNQDPNGVI 
DEGFDKTSRK CPPFCAVPMT VADGVRTIGE VELMEFMTTH LADGSGVLVD ARSPDWHAKG
TIPGSINVPY IEVSPQLGAD ELSIEAALSH FGVVDKDFSK AKYLVLWCNG PWCGQSPTAI
RGLIELGYPK EKLLYYRGGM QLWKIFGLPV VPPAAE