| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1430 |
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| Symbol | |
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| ID | 4480659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1735595 |
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| End bp | 1738423 |
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| Gene Length | 2829 bp |
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| Protein Length | 942 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639722173 |
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| Product | Sel1 domain-containing protein |
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| Protein accession | YP_865347 |
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| Protein GI | 117924730 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0790] FOG: TPR repeat, SEL1 subfamily |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.356598 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGCGTA CCCCCCTAAG CTTGGCCATC GCAGCCTGTA TCTTCAGCCC TCTGCTGTTG
ACCTTGGTAT GGTTGCAGCC CCTGCATGCC GAAGAGCTTT CGGCGGAGGC ACTTTATCGA
CAGGGATACC GCTATTTTTA TGGTCAAGGC GGTGTGGCTG TGGATCAAAA GCAGGCCTTT
CAATATTACC AGCACGCAGG TAATTTGGGG CACCCTGCCG CCCAGTATGC CACCGGATGG
ATGCTGATGA CCGGTCGGGG GATTGCCAAA AATCATGTCG AAGCGCTGCC CTGGCTAGAA
AAAGCAGCTT CAAGTGGCGA TGCCAAAGCC CAATATTTTA CAGGCATGCT CAAACTACAG
GGTGAAGGCA TTACCCCTGA GCCAAGCCAA GCCGTAGATT GGATTACCCA AGCCGCCAAC
CAAAACTATG CCATTGCCCA GCGCCGTTTG GGTCTTCTGT ACCAGCAGGG CAAGCATGTC
GCGCTCGATC CTAAACGCTC CCATGATTGG CTCGAAAAAG CGGCCGCACA GGGGGATGCT
CAAGCCAAGC AGTTGCTCTA CGCCACCAAG GTTGCCCGCT ATCACCCCCC CGTAGCCGCT
CCTGCTGCGG GGGGTAACGC GGCGAGTACC AGCACTCCGC CCCCTGCCGT GGCCGCCAAG
AGACCCGGCA ACAAAGCCGC TGCGGCTACC CAACCCTCAA CGCCCCATAG CCCCGTGCAG
GCAAGCACGC CTGCCCGCCA ACCCGTGGTC ACCGCCCCCA CCACCCGTCA ACCCGCAGCA
AACTCCACAG CTGCGGTTAC TACCCCAACA GCCCCCACAC CCGCGGTTAC CACCCCGGCG
GCCAGCCAAC CAGCGGCATT AAACTTTACT GAGCAACGCT ATCCAGGTCC TACCCCATCT
GCGGCAACGC CCGCGCCAAG CTCAACCGCG TTGGCCCCAG TGCAATCCCG CATCAACCAA
CCTACCCCCA TGGCTGCGGT GGCACCACAC GTTGCAGCGG CACCACCATC CCCCATGGCT
GCGATGGCAC CATACGTTGC AGCGGCACCA CCATCCCCCA TGGCTGCGAT GGCACCATAC
GTTGCAGCGG CACCACCATC CCCCATGGCG ACGCTTGCCA CAGACGAGAT ACCCGTCCAG
GCAGATCTTG CGATGGCACC GGACTCAGCC CGTTTACCAG AGCCTATCAA CCTAAAACAA
CTTACCGTGG CACAGACCGT CTCGTCACCG CCCCCTCTCC TGAGTAACCT TCCAGCCAGT
TGGCTGCAAC GTAAGCAGAT GTTGCGCTAT AAATTTAGGC AGTGGGTACC CGAAGAGAGC
AACTACCCGG CCTCCTTTCA CTATTTTTTG GCGGTTAAGC AGCATTTAAC ACGCGCTAAA
GCGGAACCCC AACAGCTTAA TGATGCCGTT GCCCTAACCC TGCTCTACAC CGAGGAGGGC
GGCCCGCAAC CGGCCGACTG GTTGTTTACC CTACCCCCGC AAATGTTTGA TGCCCAACAG
CAGGAGCGCG TGGTCGAAGA GCTACAGATG CGCGCCGACG AGGGTAGCCC TGCGGCCAAC
TATTTTTTAG GCATGCGCCA ACTGCATCAT GATGGGGATC TCAAGCAGGG TGTGGCACGC
ATTGAACAGA GCGCTACCCA CGGTTTTCCC CTGGCACAAC ACCGCATGTT CCTGCTCCAC
CTTCAGGGTC CAGACGCCTA TCGCGATCCC GCTAAGGCCC TAGCTTGGGG CGAAAAAGCG
GCGGCACACC AGCAGCTAGA GACCCAAGCC CGCTTAGGGC TAGAACAGCT TACCGGCAAC
TGGTTGCACA AAGATCAACA CGCGGGGCTC ACGCATTTGC GTCAGGTGGC CCAGGCCGAT
GATGGGGCCG CGCTACGCGC TCTACAAGAG GCCCTTAATC CCAAGGGGGT CAACTATCCA
GATGCCCCGG CTCTGCTCAC CCACACCCTG CAATGGTTAC GCAACTATGG CGCCCATCAA
GGGCGCGACT ATGACCTGGT CATGCAGCTC TTTTTGCGCC AGGAACCGCC CCTCAACCTC
ATTCAACGAC TAGAGCGCCT GCCTGCCCCC GCCCCAGTGG CGCAAGGGCA AGCCCTTGAG
CCCTTGGTTG AGGAAGATTT TGATCAACTA AGCCAGCACA TTGATCGGCT GTGGCGTCGC
CATTATGGGG ATCAACAGGC CCTGCAAGCC CAGCAGACGG CATTACCTGC CCGTGCACTC
TCGCCCAAAT TGCTCGAAAC CTTGGAACAG GCGGCCTTTA ACAACATCCC CCAAGCGCAA
CAGCGTTTGG CGCATCTCTA TTTGACAGGG ATTTGGGTAA AGCGTGACCT GGATAAAGCG
CGTTACTGGC TGTTTCGCCA TGCCCGTAGT GGGAATGAAC CCGATCAAGC CCGTAGTCAG
GGCCTGCTGG CCCTGTTGAT GGATGCCCAA CTGGGCCAAC GCAGCGTCAC CGCCCAGGGG
TGGATGAATC GTGCGCAAAA GTGGAATTTT CTCGCTCTGC TCGATGGTGT GCTGTTAAGC
AAGCCCGATC TTGCCATTCT ACCAAGCACC CCCTATAAAT CCTCTAGCCG CACCTTAGAT
GGTCTCTACC GCAAGAGCGC CCTGGGGCTT TATCAACTCA AAAAGGGCGG TAACCCTGCC
CCGCTCTTAC AGGGCATACA CCAAGCAGCC AAGCAGGGGC ATGCTCAGGC ACAGTTTGTA
TTAGGGCTGC TCTATCTGGA TGGTATCGGG CTTGAGGCCT CCCCCAGCAA GGCCACCCAC
TGGCACCAAC TGGCCCTGGC CCAGGGCTAC CAGCGTAGCC CTCTACAGGT TGCCGATGCC
ATGCGCTGA
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| Protein sequence | MMRTPLSLAI AACIFSPLLL TLVWLQPLHA EELSAEALYR QGYRYFYGQG GVAVDQKQAF
QYYQHAGNLG HPAAQYATGW MLMTGRGIAK NHVEALPWLE KAASSGDAKA QYFTGMLKLQ
GEGITPEPSQ AVDWITQAAN QNYAIAQRRL GLLYQQGKHV ALDPKRSHDW LEKAAAQGDA
QAKQLLYATK VARYHPPVAA PAAGGNAAST STPPPAVAAK RPGNKAAAAT QPSTPHSPVQ
ASTPARQPVV TAPTTRQPAA NSTAAVTTPT APTPAVTTPA ASQPAALNFT EQRYPGPTPS
AATPAPSSTA LAPVQSRINQ PTPMAAVAPH VAAAPPSPMA AMAPYVAAAP PSPMAAMAPY
VAAAPPSPMA TLATDEIPVQ ADLAMAPDSA RLPEPINLKQ LTVAQTVSSP PPLLSNLPAS
WLQRKQMLRY KFRQWVPEES NYPASFHYFL AVKQHLTRAK AEPQQLNDAV ALTLLYTEEG
GPQPADWLFT LPPQMFDAQQ QERVVEELQM RADEGSPAAN YFLGMRQLHH DGDLKQGVAR
IEQSATHGFP LAQHRMFLLH LQGPDAYRDP AKALAWGEKA AAHQQLETQA RLGLEQLTGN
WLHKDQHAGL THLRQVAQAD DGAALRALQE ALNPKGVNYP DAPALLTHTL QWLRNYGAHQ
GRDYDLVMQL FLRQEPPLNL IQRLERLPAP APVAQGQALE PLVEEDFDQL SQHIDRLWRR
HYGDQQALQA QQTALPARAL SPKLLETLEQ AAFNNIPQAQ QRLAHLYLTG IWVKRDLDKA
RYWLFRHARS GNEPDQARSQ GLLALLMDAQ LGQRSVTAQG WMNRAQKWNF LALLDGVLLS
KPDLAILPST PYKSSSRTLD GLYRKSALGL YQLKKGGNPA PLLQGIHQAA KQGHAQAQFV
LGLLYLDGIG LEASPSKATH WHQLALAQGY QRSPLQVADA MR
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