| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1413 |
|---|
| Symbol | |
|---|
| ID | 4482632 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1716701 |
|---|
| End bp | 1717624 |
|---|
| Gene Length | 924 bp |
|---|
| Protein Length | 307 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639722156 |
|---|
| Product | rod shape-determining protein MreC |
|---|
| Protein accession | YP_865330 |
|---|
| Protein GI | 117924713 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1792] Cell shape-determining protein |
|---|
| TIGRFAM ID | [TIGR00219] rod shape-determining protein MreC |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.0196901 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTGCCCT TGTGGAGCTT AATACGTCTA CACCGACAAA GACTAACGGC CGCAACCTTT
TTGTTGCTGG CCGTTTTTCT ATTGTTTGTC TTGCGTGCTG ATTCGCCAGG GGTGTTGGCG
TTTAAGGGGG TGCTGGCCAA CCTGTTGGGT GGGATGCAAC GGTTGGTGCT CTCCCCGGTG
GAGGCAACCC GTGCCGCTGG CCAACGGCTG CAAGAGTTGG GGCACCTGGA TGAAGAAAAC
CTACGCCTCA AACGGCTGCT GGCCAATGTG GGACCTATGC AGTTGCAACT GGACGAGGCG
CTTAAAGAGA ATCGTCGCCT GCGTCAGATT TTACGTATGT CGGTGGATCC TCACTACACC
TACACGGTGG CGCGGGTGGT GGGTGACAGC TCGTCGGCTT TTTCACGGGT ATTGTTGGTC
AATGCCGGTG CTCAGGAGAA GGTGCGACCC GACACCCCGG CGGTTAGCCC GGCCGGTGTG
GTGGGGCGGG TGGTGGCGGT GGGTACCCGT CGCAGCACGG TGCTAACCCT GCATGACATC
AACTCGCGGG TGCCGGTGCA GGTGCAGCGT TCGCGCTTGC GTGCCATGGT GGCTGGGACC
AACAGCAGTA CTCTGGAGCT ACGTTTTGTG GTCAAGGGGG GGGATATTTT GGTGGGGGAT
CTGCTCATTA CCTCGGGTAC CGGTGGGGTT TTTCCCAAAG GGGTTGGGGT TGCTCGGGTG
ACCTCGCTTA ATCCCAATGC GGATGGGTTG TTTATGCAGG CTACCGCCCG GGCATTGGTG
GATCTTGACC GCTTGGAGGA GTTGCGTCTC ATGCTGCCGG TGGTGGATGC CGAACCCCTT
AGTGAGGGTG AGGAGGCCAC CATTACGGAT CGCACCGATT TGCGCCCCTT GGGATTGCTG
CCCGAGGGGA CAAACACACC ATGA
|
|---|
| Protein sequence | MLPLWSLIRL HRQRLTAATF LLLAVFLLFV LRADSPGVLA FKGVLANLLG GMQRLVLSPV
EATRAAGQRL QELGHLDEEN LRLKRLLANV GPMQLQLDEA LKENRRLRQI LRMSVDPHYT
YTVARVVGDS SSAFSRVLLV NAGAQEKVRP DTPAVSPAGV VGRVVAVGTR RSTVLTLHDI
NSRVPVQVQR SRLRAMVAGT NSSTLELRFV VKGGDILVGD LLITSGTGGV FPKGVGVARV
TSLNPNADGL FMQATARALV DLDRLEELRL MLPVVDAEPL SEGEEATITD RTDLRPLGLL
PEGTNTP
|
|---|
| |