Gene Mmc1_1381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1381 
Symbol 
ID4482476 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1673903 
End bp1674169 
Gene Length267 bp 
Protein Length88 aa 
Translation table11 
GC content62% 
IMG OID639722124 
Productmicrococcal nuclease-like protein 
Protein accessionYP_865298 
Protein GI117924681 
COG category[L] Replication, recombination and repair 
COG ID[COG1525] Micrococcal nuclease (thermonuclease) homologs 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.0429202 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTTTATA CGCTTTTTAA GCAGAAAGTC CGGGCCAAAT GCCCGGAGGA AAAGCGGATG 
GCCCTGGAGG CCAAGGAGCG GGTCCGGCAA CTTCTGGCGA AAGCGGAACA CGTCACGTTA
CGAGAGACGG GGCGGGACAA ATACTTCCGC ATTGTGGCCA GGGTGGTGGC GGACGGAGTG
GACGTGGGGG AGATGCTGAT CCGGGAGGGG CTGGCGGCGC CTTACGACGG CGGGAGAAAG
ACCGGGGAGT GGTGCAGGAC GGAATGA
 
Protein sequence
MLYTLFKQKV RAKCPEEKRM ALEAKERVRQ LLAKAEHVTL RETGRDKYFR IVARVVADGV 
DVGEMLIREG LAAPYDGGRK TGEWCRTE