| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1243 |
|---|
| Symbol | |
|---|
| ID | 4484123 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1542805 |
|---|
| End bp | 1543197 |
|---|
| Gene Length | 393 bp |
|---|
| Protein Length | 130 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 639721986 |
|---|
| Product | peptidase M15A |
|---|
| Protein accession | YP_865160 |
|---|
| Protein GI | 117924543 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.207822 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCTGAAC AGCATTGGCC ACATTTCTCC CATGCTGAAC TGCAATGCCA TTGTGGCTGT
GGCCGGTCGG TGATGGACGA GCGTTTCATG GCTCGGCTTG AAGAACTCCG CATGGCCTAT
GGCAAACCCA TTATCGTCAA CAGCGCATAC CGCTGCCCCA ACCACAACGC ATCCGTATCC
ACAACCGGAT CCAATGGACC TCACACCACC GGCAGGGCTG TAGACGTACA GGTCTCCGGT
GAAGATGCCC ATGCCCTGAT GGCGTTGGCC ATGCACCATG GGTTCACCGG CATCGGGGTT
AGCCAGCGAG GCCAGCACAA GTCCCGTTTC ATCCACCTGG ACACCTTGGA TGCAGCACTT
GGTCAGCCTC GGCCAACGAT TTGGTCGTAC TGA
|
|---|
| Protein sequence | MSEQHWPHFS HAELQCHCGC GRSVMDERFM ARLEELRMAY GKPIIVNSAY RCPNHNASVS
TTGSNGPHTT GRAVDVQVSG EDAHALMALA MHHGFTGIGV SQRGQHKSRF IHLDTLDAAL
GQPRPTIWSY
|
|---|
| |