| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_1087 |
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| Symbol | |
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| ID | 4482102 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 1331372 |
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| End bp | 1332130 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 639721836 |
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| Product | TatD-related deoxyribonuclease |
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| Protein accession | YP_865011 |
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| Protein GI | 117924394 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0084] Mg-dependent DNase |
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| TIGRFAM ID | [TIGR00010] hydrolase, TatD family |
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Plasmid Coverage information |
| Num covering plasmid clones | 40 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.274237 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGACA CCCACTGCCA CCTGGACGAC CCCCATTTAT ACCAGCGTCT AGAGGCCGTG
TTAAGCCGCA GCCGCGCCGC TGGTGTTAGC CAGTGGGTGG TGCCCGGTGT GAGCTTGGCG
GGTTTTCCTG CATTGCAAAA GTTACAAAGG CCGGGCATAA CCCTAGCCCT GGGGCTACAC
CCCTTTTTTA TGGCGCAACA CCCGGTGGAT GCCATCGACC AACTGCAATA CTGGTTAGGC
CTGCTGCAAC CCCCGTTGAT GGGTGAAATT GGCCTGGACT ATACCCTACC CGCCACCACC
CACGCAGCCC AGCAGCACCT CTTACGGCAA CAGTTACGGC TGGCCCAGCA ACGGCAAAGC
CCGCTGTTGC TGCATGTGCG CAAGGCTCAC GAACCCATGT TACAGATGCT TAACCAGCTC
AAATTTCCCT GGGGCGGCAT TGTGCATGCC TTTAATGGTA GCCTGGATCA GGCCACCCGT
TATGGCCGGT TAGGCTTTAA ACTCGGCTTT GGCGGCATGC TCACCCGGCC CCACTCACGA
CGCTTGCAAA CCCTTGCACG CAGTGTGGAT GACACCGCCC TCGTGTTGGA AACCGATGCC
CCAGATCTAC CGCCACACCC CCACAAAGGC AAGATTAATG AGCCTGCCCT ACTCCCGGTG
GTGGCGCAAA AATTGGCAGA TCTGCGCGGG GTTTCCCTGG CGCAGATGGT CGCCCTTACC
AGCCGCAACG CCCGTGTGGC CCTTAACCTG GAATGCTAA
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| Protein sequence | MIDTHCHLDD PHLYQRLEAV LSRSRAAGVS QWVVPGVSLA GFPALQKLQR PGITLALGLH
PFFMAQHPVD AIDQLQYWLG LLQPPLMGEI GLDYTLPATT HAAQQHLLRQ QLRLAQQRQS
PLLLHVRKAH EPMLQMLNQL KFPWGGIVHA FNGSLDQATR YGRLGFKLGF GGMLTRPHSR
RLQTLARSVD DTALVLETDA PDLPPHPHKG KINEPALLPV VAQKLADLRG VSLAQMVALT
SRNARVALNL EC
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