Gene Mmc1_1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_1067 
Symbol 
ID4481354 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1306094 
End bp1306735 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content57% 
IMG OID639721815 
Producthypothetical protein 
Protein accessionYP_864991 
Protein GI117924374 
COG category[S] Function unknown 
COG ID[COG2847] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.263125 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.430464 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAAAG CAATGCTGCG GGTGGTGATG CTGCTGTTAA GTGGGGTTGG TGTGGCGCAG 
GCGCAAGCCC CGGCCAATGC CATGATGGTC TCTGATGGTT GGGTGCGGGA GATGCCTGCC
AATATGCGCA TGAGTGCGGC TTTTATGGTG TTGATGAACC ACAGCATGGA TGCGGTATCT
TTGTTAAAAG CCAGTTCCCC GCAGTTTGAG CGGGTGGAGT TGCACCGTTC CATGCCGGTG
GATGGGGTGA TGCGTATGGT GGAGCAGTCG CGCATACCGG TACCGGCCCA GGGCAAGACC
ATTCTCAAGC CCGGCGATTG GCATGTGATG TTGATGATGG GTAAGGCCGC CCTGAAAGCG
GGGGATACGG TGGATTTAAC CTTAAGCTTT GATAATGGGC AGGAGCTAAG TTTGGTGGTG
CCGGTGAAAA AGATGCCCAG CCACGCAGGC ATGGTGCCCC CCAGCGCGGC GGGCCATGGC
ATGCTGCATC AGGGTCATGA GATGATGCAG CAGGGTCATA ATATGATGGA GCAGGGGCAG
CAGCAGATGA TGGATCACAG CATGATGGGG CATCAAGGCA TGCAACATGG GATGGAGCAG
GCCGGTGAGG CCGCCAAGGG GTCTATGCCC GCCATGCAGT AA
 
Protein sequence
MIKAMLRVVM LLLSGVGVAQ AQAPANAMMV SDGWVREMPA NMRMSAAFMV LMNHSMDAVS 
LLKASSPQFE RVELHRSMPV DGVMRMVEQS RIPVPAQGKT ILKPGDWHVM LMMGKAALKA
GDTVDLTLSF DNGQELSLVV PVKKMPSHAG MVPPSAAGHG MLHQGHEMMQ QGHNMMEQGQ
QQMMDHSMMG HQGMQHGMEQ AGEAAKGSMP AMQ