| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0961 |
|---|
| Symbol | |
|---|
| ID | 4480483 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | + |
|---|
| Start bp | 1177373 |
|---|
| End bp | 1177864 |
|---|
| Gene Length | 492 bp |
|---|
| Protein Length | 163 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639721709 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_864885 |
|---|
| Protein GI | 117924268 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0802] Predicted ATPase or kinase |
|---|
| TIGRFAM ID | [TIGR00150] ATPase, YjeE family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 0.14989 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00154455 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGCAA CCCTTGTGCT GGAAAGCCAC TCCGAAGCGC AGACCGAGGC GCTGGCTGCG
GCGTTGGCGG GTATGGTGGA TGCCCCGCTG GTGATCGCTT TAAGCGGCGA TTTGGGGGCG
GGTAAAACCG CTTTTTCCCG TGGTTTTGTT CAGGCGATGT TGGGCGAAAG GGTGGTGGTG
AGCAGCCCTA CCTTTGCCAT CATGCAGAGT TATGTGGGGG GGGCTTGGCC AGTCTACCAT
TTTGACCTCT ATCGGCTGGC CGGGCCGGAG GAGTTGGAGG CCATTGGGGC AGACGAAGCG
CTGTTTGAGC CCGACGGCGT GGCCCTGGTG GAGTGGGCCT CCTTAGCGGG GGATTGGCTG
CCCCAGGACC GGCTGGACGT TATGTTGGAA ATAACCGCAG ATGGGTTGGG ACGCCGCGTG
CTGTTTCGTG CGGCAGGTTT GGTCACGACA CAACTTCTTC ACCGTTTTCG CCAGGAATAT
CATGCTGGAT AA
|
|---|
| Protein sequence | MAATLVLESH SEAQTEALAA ALAGMVDAPL VIALSGDLGA GKTAFSRGFV QAMLGERVVV
SSPTFAIMQS YVGGAWPVYH FDLYRLAGPE ELEAIGADEA LFEPDGVALV EWASLAGDWL
PQDRLDVMLE ITADGLGRRV LFRAAGLVTT QLLHRFRQEY HAG
|
|---|
| |