Gene Mmc1_0960 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0960 
Symbol 
ID4480482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp1176899 
End bp1177360 
Gene Length462 bp 
Protein Length153 aa 
Translation table11 
GC content56% 
IMG OID639721708 
ProductCBS domain-containing protein 
Protein accessionYP_864884 
Protein GI117924267 
COG category[T] Signal transduction mechanisms 
COG ID[COG3448] CBS-domain-containing membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.0461508 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00174257 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGACCTTAA CAGCTCGCGA TATCATGAAT AGCGACCCGC CAACCGTAAC CGTCCATGCC 
ACGGTGCATG AGGTTGCGGT GTTGTTGGCC CAGAAGAACA TCTGCGCCGT GCCGGTTTTA
GATGAGGGGG TGCTGGTGGG GATTATTACG GAAGGGGATC TGATTGATCG GGTCAAGCAG
GTGCATCTGC CCACCCTTAT CAATATCTTG GACGCGGTGA TCTCGGTGGG GGGCAGTCAT
CAGTTTGAAG AGGATCTGCG TAAGGTTGCC GCGTGTAAGG CGTCGGAGAT TATGACCCCC
ACCCTTATCT CGGTGGGTCC CGATGCGGAT CTGCGCAAGA TCGCCACGGT GTTGGCGGAA
CAACATGTGT CGGTGGTGCC GGTGGTGGGT GAAGAGCGGC TGCTGGGGTT GATTGATAAG
AGCGATGTGA TCCGTGGCAT GCTGCTGAGT AACGAAGCTT AG
 
Protein sequence
MTLTARDIMN SDPPTVTVHA TVHEVAVLLA QKNICAVPVL DEGVLVGIIT EGDLIDRVKQ 
VHLPTLINIL DAVISVGGSH QFEEDLRKVA ACKASEIMTP TLISVGPDAD LRKIATVLAE
QHVSVVPVVG EERLLGLIDK SDVIRGMLLS NEA