| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0701 |
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| Symbol | |
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| ID | 4481274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 838492 |
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| End bp | 838995 |
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| Gene Length | 504 bp |
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| Protein Length | 167 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639721444 |
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| Product | CheD, stimulates methylation of MCP proteins |
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| Protein accession | YP_864628 |
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| Protein GI | 117924011 |
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| COG category | [N] Cell motility
[T] Signal transduction mechanisms |
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| COG ID | [COG1871] Chemotaxis protein; stimulates methylation of MCP proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 0.0356622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.347186 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAGCCC CCCAAAGTGA TCTAATCCTT GCCCCTGGGG AGCTCTATAT TGGCTTTCAC
CCCGCCAAGG TGCGTACCAT TTTGGGCTCT TGCGTCTCTG TGACCCTGTT TCACAAAGGC
CCTCGTCCCA TGGGGGCGAT CTGCCATGCC CGCCTACCCC ACTGTGAGCA CCCCTTGGCC
CCTGCCATTT TAATCCGGGA TGGGGATAGC CACTATATGG ATAGCGCCTT AACCTTCATG
ATTCGCCTCT TCCGCGAAAT GGGCTGCCGG GATGAAAATA TCGAGGTCAA GCTGTTCGGT
GGTGCCAACA TGTTTAATCG TGATACCGAC CGTAATATGA TGACCGTGGG CTTGCGCAAC
ATCCAAACCG CCATGGAGAT CATCAACCGC GAACATTTAC ATCTCATTAG TTCAGACGTC
GGGGGTAACA AAAGCCGCTC CCTGCTGTTC GATACCCACA GTGGCGAAGT TCTACTGCGG
CGCGGCACAA ACACCGATAC CTAA
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| Protein sequence | MPAPQSDLIL APGELYIGFH PAKVRTILGS CVSVTLFHKG PRPMGAICHA RLPHCEHPLA
PAILIRDGDS HYMDSALTFM IRLFREMGCR DENIEVKLFG GANMFNRDTD RNMMTVGLRN
IQTAMEIINR EHLHLISSDV GGNKSRSLLF DTHSGEVLLR RGTNTDT
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