Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Mmc1_0552 |
Symbol | |
ID | 4481386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Magnetococcus sp. MC-1 |
Kingdom | Bacteria |
Replicon accession | NC_008576 |
Strand | - |
Start bp | 671650 |
End bp | 672609 |
Gene Length | 960 bp |
Protein Length | 319 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 639721299 |
Product | 2-dehydropantoate 2-reductase |
Protein accession | YP_864483 |
Protein GI | 117923866 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1893] Ketopantoate reductase |
TIGRFAM ID | [TIGR00745] 2-dehydropantoate 2-reductase |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGACT CAACCACACC CCCCCAAACC CCACACACAC CCACCGTATT GGTGGTAGGT ACCGGCGCTG TGGGCGGCTT TTATGCCGCC CGACTGGCCG CCGCTGGGGC ACAGGTTTCG GTGGTATGTC GCTCCGATTA TGCTACCATC GCCCAACAGG GTATCACCAT TCACAGCTTT AAGTTTGGCG AGCAGCACTT TCACCCCTAC TCTGTACACG AGCAGCCAGA AACGTTTCCC GGCACCCCCG ATTATATGCT CATCACCCTT AAAGTGCTGC CCCAAATTGA CCTAGCTGCC ATGGTCGCCC CCAAAATTGG GCCAAACACC ACCCTACTCC TCATCCAAAA CGGTATTGAG ATTGAAGAAA AGCTTCACCA AGCCTTTCCC AATACCCCAA TGATCAGCGC ATTAGCCTTT GTTTGTGTAA GCCGTACCCA ACCTGGCCAC ATTGACCATC TCTGCTTTGG GCATCTCAGC ATGGGGCACT ATCCACCCCA ACCGGTGCAA CCCGCCCTAA CCCAGCTGGT GCAGCTCTTT AAGCATGCAC AAATTGACGC ACACGCCACC GACAATGTGG TTACCGCCCG CTGGCGCAAA TTGGTCTGGA ATGCCCCCTT TAACGGGGTC TCTGTACTGG CTGGTGGGCT AAACACCCGC GAAATCATGG ACGACGCCCC CCTGCAACAG CTCTGTCGGG ATGTCATGGC CGAGGTGGTG GATTTGGCCG CAGCGGCGGG CCATGCCCTG GCGGATGATG TGATCGAGGT CAATATGCAG GCCACTGAAC GCATGCAGCC CTACCGAACC AGCATGCTGT TGGACCATGA GGCTGGCCGT GAGATGGAGG TGGAGGCTAT TTTTGGCAAC GCCCTACAAC GCGCCCAGCA GCTGGGCCGT AGCTACCCAC ACTTGCAAAG CTTTTATGCC CTGCTTAGGG CCATCGGACG AAAGAGATGA
|
Protein sequence | MTDSTTPPQT PHTPTVLVVG TGAVGGFYAA RLAAAGAQVS VVCRSDYATI AQQGITIHSF KFGEQHFHPY SVHEQPETFP GTPDYMLITL KVLPQIDLAA MVAPKIGPNT TLLLIQNGIE IEEKLHQAFP NTPMISALAF VCVSRTQPGH IDHLCFGHLS MGHYPPQPVQ PALTQLVQLF KHAQIDAHAT DNVVTARWRK LVWNAPFNGV SVLAGGLNTR EIMDDAPLQQ LCRDVMAEVV DLAAAAGHAL ADDVIEVNMQ ATERMQPYRT SMLLDHEAGR EMEVEAIFGN ALQRAQQLGR SYPHLQSFYA LLRAIGRKR
|
| |