Gene Mmc1_0539 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0539 
Symbol 
ID4481443 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp647143 
End bp647952 
Gene Length810 bp 
Protein Length269 aa 
Translation table11 
GC content54% 
IMG OID639721286 
Producthypothetical protein 
Protein accessionYP_864470 
Protein GI117923853 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGTAAGA CCCCCCGTTT GTTCCCGCGC CTGCTGCTGG GCACACTGCT GCTGCTACCC 
GCTTTGGGCA GCCCCCAAGC CCAGGCCGAA ACCAGTCAGG AGAAGGGTTT GCGGCTGGTG
CAAGAGGCCG ATAAGCAGGA TTTTGGCTAT GTGGATCTCA CCGCCCAATT GGAGATGGTG
CTCACCAACC GCCAAGGGGA TAGCAGCAGC CGTAAGATTC GCATTAAGAT GAAAGAGGTC
GCCGATGATG GTGATATGTC CCTCTCGGTG TTTGATACCC CGGCGGATGT TAAAGGCACG
GTGATGCTCA CCCACTCTCA CGCGGTCAAA CCCGACGATC AGTGGATGTT TTTACCCGCC
GTCAAACGGG TTAAGCGTAT TGCGTCGCGT AATAAATCGG GTCCCTTTAT GGGCAGTGAA
TTTGCCTTTG AGGATCTGGC CTCGCAAGAG GTCGCCAAAT ATACCTACAA CTATCTGCGT
GACGAGGTGA TTGATGGCCG CGACAGTTGG GTCATTGAGC GCCGCCCGGC CTATGCGTAC
TCTGGTTATA CCCGCCAGGA AGTGTGGTTG GATAAGGTGC GTTTGCAGCC CAATCAGGTT
ATCTACTATG ACCGTAAAAA CGACCTTTTA AAAACCCAAA CCTTCTCTGG CTACCAGCAA
TATCTGGGGC GCTATTGGCG CCCATCGCTC ATGCTTATGG TCAATCACCA GACCCACAAA
CAGACCACGC TAAGCTGGCT CGATTATCGG TTTAAAAACG GCTTTTCTGA CCGAGAGTTC
CACAAAGACG GCATGCAACG GACCCGCTAA
 
Protein sequence
MRKTPRLFPR LLLGTLLLLP ALGSPQAQAE TSQEKGLRLV QEADKQDFGY VDLTAQLEMV 
LTNRQGDSSS RKIRIKMKEV ADDGDMSLSV FDTPADVKGT VMLTHSHAVK PDDQWMFLPA
VKRVKRIASR NKSGPFMGSE FAFEDLASQE VAKYTYNYLR DEVIDGRDSW VIERRPAYAY
SGYTRQEVWL DKVRLQPNQV IYYDRKNDLL KTQTFSGYQQ YLGRYWRPSL MLMVNHQTHK
QTTLSWLDYR FKNGFSDREF HKDGMQRTR