Gene Mmc1_0451 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0451 
Symbol 
ID4484014 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp543528 
End bp544220 
Gene Length693 bp 
Protein Length230 aa 
Translation table11 
GC content56% 
IMG OID639721198 
Producthypothetical protein 
Protein accessionYP_864382 
Protein GI117923765 
COG category[S] Function unknown 
COG ID[COG1434] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.0851165 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGCTGG CTTTTTTGTG CATGCGGCGT TGGCCTAAAT TGGCTCGTTT TACCCTGGTG 
TTGGCCATGT TGGCGCTCTA TCTACAAAGC GCACCTTGGG TTTCGGAGGC GATGATCCAA
TATTTGGAGT CTAAAACCCA AGCGCTTAAC CCCCAGCGAG CGGCGGCTGA CCCTGCTCAA
CTGACGGTGG TGTTGGGGTG CGGTCGCTAC CCAGAAGCGC CAGAGTATGG TGGGGTAGAC
ACCCTTTCTA CCTGTGGTTT GGCGCGGGTA CGCTATGGCG CCTACCTTTA CCGCGCCACA
GGACGCCCCA TTTTGGTTGC AGGGGGGGCC CCTTATGGAG AACAGCGTTC CGAGGCCGAT
GCCATGGCCG AGGTGCTGGA GCGGGAGTTC CGCATCCCGG TTATGTTTCG CGAAGGTGGC
AGCCGCAACA CCTGGGAAAA CGCCAAAAAT AGCGCCGCCA TTTTAAAGCG AGAAGGATTG
ACCCACATTT TTTTAGTCAC CCACGCCAAA GATATGTCCC GCGCCGCTTG GGCATTCCGG
GAACAGGGCA TACAAGTTAC AGAAGCCCCT ACCCTATTTA AAACCAAAAG CCCTGCGTGG
CCCCTTCCCT ATCTGCCCGA TAATTTTTAT GAGTTTCGCT GGGCCCTTCA CGAACTGGTC
GGTATACTCT ATTATCGACT GGTCGCTCAC TGA
 
Protein sequence
MLLAFLCMRR WPKLARFTLV LAMLALYLQS APWVSEAMIQ YLESKTQALN PQRAAADPAQ 
LTVVLGCGRY PEAPEYGGVD TLSTCGLARV RYGAYLYRAT GRPILVAGGA PYGEQRSEAD
AMAEVLEREF RIPVMFREGG SRNTWENAKN SAAILKREGL THIFLVTHAK DMSRAAWAFR
EQGIQVTEAP TLFKTKSPAW PLPYLPDNFY EFRWALHELV GILYYRLVAH