Gene Mmc1_0426 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0426 
Symbol 
ID4483913 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp509828 
End bp510727 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content52% 
IMG OID639721174 
Producthypothetical protein 
Protein accessionYP_864358 
Protein GI117923741 
COG category[E] Amino acid transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGGTTAG CATTGGGTTA TCTGCTTAGT TTTTTCTATG CTGTGGCACT GTTTTCCAGT 
GCCCAAGCTC ATGATATTCT ACAGATACCA ATGGACAGCC CATTCTACGA CTTTTGCGCG
GGAATGGACG CTTTTCAGCA CTTGGACGGC GATCACTCCG CTTTAACCGA ACACCACCCA
GCTCCTTGTC TATGTGGCGA AAAATGGCAT ACCCTTAAAG CCAGCTTGCG CTTAAACACC
ACTTCGTCAA ACCCTTTAAG TAATGATAGC TTTACTGGTT TTCAGGATTT GCTTACGCTG
GAGGCCTTTT GCCGACAGAA CCTACGTATC TCTTTGACGC ATCTGGCGGG CAAACCCTCC
CTGCACATGG CCAACCGTGG TGTGGATGAT GGCACAGTCG GCCGTATTGC CAGCCTGTTG
GAAGATGCCC ATCTGTCTAA TCTTGTTGCG GTGCCTGAAT CCATCATGGC CTGGGATTTT
TCTGCCTTTA CCCGCACCCC TTCGATGCAA CCCCATAGCT GGGCGGAGCT GGCCCCCTAC
CATGTTGCCT ATAATCGTGG CTGGATCATT CTCGATCATG CCATTCGCAC CACCAAGTCC
ACCGTACGCA CCCAAGATAG CGTTCAGTTG TTGACGCTGT TGGCCAAAAA TAGGGTTGAT
GTGGTGGTGG TGGAGAAGTG GCAAGGGCTC GCTGCGGCTA GCCAAATCGG CATGCAGCCG
CTCTATTTGG TCAACCCGCC ATTGGCCAGC CAGCCCATGT ATCTTTTTCT ACACCGTAAC
CATCGTGATT TAGTCAAACC CCTGGCCGCT ACCCTGCAAC AGATGAAACA AGATGGCACT
TACCAGGCAA TCTTTGCGCA CACTTTACAA CCCCTCATCG CACCGATTGT AACGCCGTGA
 
Protein sequence
MRLALGYLLS FFYAVALFSS AQAHDILQIP MDSPFYDFCA GMDAFQHLDG DHSALTEHHP 
APCLCGEKWH TLKASLRLNT TSSNPLSNDS FTGFQDLLTL EAFCRQNLRI SLTHLAGKPS
LHMANRGVDD GTVGRIASLL EDAHLSNLVA VPESIMAWDF SAFTRTPSMQ PHSWAELAPY
HVAYNRGWII LDHAIRTTKS TVRTQDSVQL LTLLAKNRVD VVVVEKWQGL AAASQIGMQP
LYLVNPPLAS QPMYLFLHRN HRDLVKPLAA TLQQMKQDGT YQAIFAHTLQ PLIAPIVTP