| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0351 |
|---|
| Symbol | |
|---|
| ID | 4481211 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Magnetococcus sp. MC-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008576 |
|---|
| Strand | - |
|---|
| Start bp | 404673 |
|---|
| End bp | 405140 |
|---|
| Gene Length | 468 bp |
|---|
| Protein Length | 155 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 54% |
|---|
| IMG OID | 639721099 |
|---|
| Product | 17 kDa surface antigen |
|---|
| Protein accession | YP_864283 |
|---|
| Protein GI | 117923666 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG4520] Surface antigen |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAGCG GTAGCGGTAC CTTTAAATGG ATGGTTATCT CGGTCGCAGC GCTGTTTTTA
TTAAGTGGCT GTGCCGCCCC ACAGAACAAG GCCCAAGGCG GTGCTATGGT GGGTGCCCTA
GGTGGCGGTC TGGCCGGTAG CCTGATGGGA AACAGCAAGC ATAAAGAGCG TAATGCACTC
ATTGGTGCCG CTCTGGGCGG GTTGCTGGGC TACAGCATTG GTAACGAGAT GGATAAAGCC
GATCTCTTAA AGCTTAATAA TGCTTATGAG TCCACCCCCT CTTATCAGAC CACCGATTGG
GTCAACCCTG ACAGTGGCCG CAAATATGAA GTCACCCCTA AGCCCGCTGC GCGTACGGCT
GGCCGTGTCT GTCGTGATGC AGAGATTAAG GTGTGGATTG ATGGCCGTCC CGAGACAGCC
ATTCAGCGGG CCTGTCGTAA CCCTGATGGG ACATGGCAAA TGATCTAA
|
|---|
| Protein sequence | MKSGSGTFKW MVISVAALFL LSGCAAPQNK AQGGAMVGAL GGGLAGSLMG NSKHKERNAL
IGAALGGLLG YSIGNEMDKA DLLKLNNAYE STPSYQTTDW VNPDSGRKYE VTPKPAARTA
GRVCRDAEIK VWIDGRPETA IQRACRNPDG TWQMI
|
|---|
| |