| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0338 |
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| Symbol | trpA |
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| ID | 4482868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 390297 |
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| End bp | 391076 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721086 |
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| Product | tryptophan synthase subunit alpha |
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| Protein accession | YP_864270 |
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| Protein GI | 117923653 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0159] Tryptophan synthase alpha chain |
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| TIGRFAM ID | [TIGR00262] tryptophan synthase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.291967 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAGTCGCA AAAGCGCCCT GGAGGGCCAC ATTAAAGATA AATTGCAGCA GCAGGATATT
CTGCTGATGT CCCATATTGT GTTGGGCTAC CCCTCTTTAC AGGCCAACCG AGAGGTGATC
CGTGCCATGG TGGCGGGGGG GGTGGATCTC ATGGAGTTGC AGATTCCCTT TTCCGAGCCC
ATCGCCGATG GTCCCACCAT CGCGCGGGCC AACCAAGCGG CCCTGGATGG GGGGTTTAAG
GTGCGCGAGG GGTTGGCCTT TATTCGTGAG GTGGTGGCCG CGTTTAATAT TCCGTTCTTG
ATTATGACCT ATACCAACAT TCTCATGGCC TATGGTGTGG AGCGTTTTAT TGATGAGGTG
GCGGACATCG GGGTTAAAGG GTTGATTATT CCCGATCTGC CTTTGGAGCA GGCACAGGCA
GCCATTGAAC AGTGCCGGGC CAAGGGTATG GATTGGATCG GGTTAATGAC CCCCACCAGC
GTGGATGAGC GGTTAGGCAA GATTGGCGCG GCGGCGGATG GTTTTGTCTA TTGTGTCGCC
CGCCGGGGTG TGACCGGTAG CAAGACCTCC TTTGATGAGC ATGTGGGTGC CTTTATGCAT
CGCTGTCGGC AGGCTACCCC TGTACCTTTG GCGGTGGGTT TTGGGGTGCG CAGTGCCGAG
GATGTGGACT ATCTCAAGGG TAAAGCAGAG ATTGCTGTGG TGGGCAGTGC GGCGCTGGAT
CTGTTTGACC AAGCGGGGGC AGCGGCGCTA GAGCCCTTTT TTCGCGGCTT GCGGGGTTAG
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| Protein sequence | MSRKSALEGH IKDKLQQQDI LLMSHIVLGY PSLQANREVI RAMVAGGVDL MELQIPFSEP
IADGPTIARA NQAALDGGFK VREGLAFIRE VVAAFNIPFL IMTYTNILMA YGVERFIDEV
ADIGVKGLII PDLPLEQAQA AIEQCRAKGM DWIGLMTPTS VDERLGKIGA AADGFVYCVA
RRGVTGSKTS FDEHVGAFMH RCRQATPVPL AVGFGVRSAE DVDYLKGKAE IAVVGSAALD
LFDQAGAAAL EPFFRGLRG
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