| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0305 |
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| Symbol | |
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| ID | 4481653 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 352637 |
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| End bp | 353521 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639721054 |
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| Product | squalene/phytoene synthase |
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| Protein accession | YP_864238 |
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| Protein GI | 117923621 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1562] Phytoene/squalene synthetase |
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| TIGRFAM ID | [TIGR03464] squalene synthase HpnC |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCTGGT TTACAGGTCC CACCATACCC TACCATCTGT TGCAGGATTT TGACTACTGC
CAGCGGGTGG TGCGTGCCAA CAGTGAAAAT TTTCCTGTGG GTTCCTTGTT GGCACCGGCG
CGTTTACGGC CCCATATCCA TGCGGTTTAT GCTTATGCTC GCATGGCCGA TGATTTTGCC
GATAGCAGTG AGGGTAGCCC TAAGGAGAAG TTACAAAAGT TGGATGATTG GCAGCGCCGT
TTAGAGGCCG CCCAGCGTGG AGAGGCCGAT CATCCGGTGT TTCGCGCCCT AGCCTATACC
ATGCAGCAGA TGCAGTTGCC CATTGATCCC CTACGGGATC TGCTCATGGC GTTTCGTATG
GATATTACCT GCAAACATTA TGATACCACC CAAGAGTTGC TGGAGTATTG CCGATATTCG
GCCAATCCGG TGGGGCGCAT TGTGCTGCGG CTGGCGGGTT ATCGGGATGA AACCCTGATG
GGTTATGCCG ACGCCATTTG CACGGCCTTG CAACTGACCA ACCATTGGCA GGATCTGGGT
GAGGATCCGT GGAACGGGCG TCCCCTCTAT CTTCCTAGGG AGGAGATGGC CCGTTTTGGG
GTCAAGGAGG CGGATATCTT ACAGCGGCGT TTTTCAGCCG CCGCCGCCGA GCTGATGATG
CACCTAATTG CGCAGACGCG GGCGCTCTAT CTACAGGGGG AGCCCCTGCT GACCAAAGTG
TCCTGGCCCC TTAATCTCGA ACTGGGGGCG ACCTGGGCGG GGGGCATGGC GGTCTTGGAG
CGGATTGAGC AGTTGGGGGG TAATACCTTG CGGGAGCGGC CCTCCCTGGA TAAACGTGCC
AAAATGGGCT GCTTGTTGCG GGGCCTAGGG CGGGTGTGTC GATGA
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| Protein sequence | MSWFTGPTIP YHLLQDFDYC QRVVRANSEN FPVGSLLAPA RLRPHIHAVY AYARMADDFA
DSSEGSPKEK LQKLDDWQRR LEAAQRGEAD HPVFRALAYT MQQMQLPIDP LRDLLMAFRM
DITCKHYDTT QELLEYCRYS ANPVGRIVLR LAGYRDETLM GYADAICTAL QLTNHWQDLG
EDPWNGRPLY LPREEMARFG VKEADILQRR FSAAAAELMM HLIAQTRALY LQGEPLLTKV
SWPLNLELGA TWAGGMAVLE RIEQLGGNTL RERPSLDKRA KMGCLLRGLG RVCR
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