| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0293 |
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| Symbol | |
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| ID | 4483350 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 333465 |
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| End bp | 335834 |
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| Gene Length | 2370 bp |
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| Protein Length | 789 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639721042 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_864226 |
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| Protein GI | 117923609 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3914] Predicted O-linked N-acetylglucosamine transferase, SPINDLY family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGTGC AGAACCCTTC ATCCGTCCCA GCGTTTACAC AGGCAATGCA TCATCTCCAG
CAGGGCCAAA CGGCGCAGGC GATGGTGTTG TTTCAGGACG TCCCCGCTGG TGATCCTGGT
TTTGTAACCG CCCAGCTTAA TTTGGGCATA CACGCCCACT ATCAACAGCA GTGGCAAGAG
GCCGAGCAGT ACTACAAGGG CGTGTTGGCC TTGGCACCAC AACATCCCCA GTGTCAGCAG
CAGCTCTTTA TCCTTTATAA AACCTTGCAG CGTGAGCAAC CGGCTCAACA GCTCATGCAA
CACCTATTGG CCGCAACCCA TGGGGATCCC TTGCTGTGGC AGCAGTGGGC AGAAACCTTG
GCCCACTATG GTGAGGTTAA CGGGGCGCTA AGCTGCTGGG CACACGCTTA TCGTTTGCAG
CCCGACAATC CACAGCCCCT ACGCGCCATG GCGCAACGGT TGGAGCAGCA AGGCCGCATC
CAGGAGGCCA CCGAGCAACT GCAACAGCTC GCCCAAATGT TGCCCGAAGA TCTGGATCTT
TTGCTGCATC TTGTGGGGCT GCTCAAACAG ATTGGCAAGC ACACCGCCGC CGAAGCCTAC
TTACGGCAGC GTTTGGTTGA ACATCCCCAA TCCCAACCGT TGCGCTTTGC CCTGGCCAAT
CTGTTGATGG ATCAGGGTAA CTTGGCCGAA GCCGAGACGC TGTTTCGTCA AAACCTGCCC
GATCACCTGC TTAGCCAGCT TAATCTGGGG GTTATCTATG GCCGTCAGGG GCGTTATACC
GAGGCTCTGC ACCTTTTTCG TCATGCCAAT GCGGTCACCC CCAACCATCT TTTTACCGGT
TATAACCTTG CGGTGCTTTG TCTACAGATC GGGCAATTGG ATGAGGCGCA AGCCCTGCTT
GAGCAGGCCA TCGCGCACCA TCCACAGCAG GTGGCTTTGC GTAATACCCT AGGGCAAGTC
TATGCACGGC AACTAAAATT CACCCAGGCA ATTCAATGTT TTCATGCAGC CTTACAGCAA
CAACCCCAAT GTGAAAGCTA TCTACAGTTA GGTACCCTCT ACCGCAACAG CGCTCAGCTT
GCAGAAGCCA AACAGTGTAA TGATCAAGCG GTGTTGTTGG ATCCCGAAAA TTTAGAGGCA
CGCACCCATC AACTTTTTTT AGCCCACTAT CTGCCAGATG CCCATCAAGC GCAGATGTTG
GCGCAAGCCC GCGCCTTTGG TCAATTGGTT GCGGGGCGGG CCAAGCCCTT TGCGCACGCG
GTACCCGCCA GCCCCCCAAA ACCCCTGCGG GTGGGGTTGG TTTCGCCCGA TCTGCGTGGT
CACCCGGTGG GTTATTTTTT AGAGTCTATC GTGCATGCCA TGGATGGTCA GCGCATTATG
TTGTGCGCCT ATAACAGTGG TCCACCGGGG GATGCACTGA CCCAACGTCT ACAAAGTCGC
ATGGCCCATT GGCGGGATAT TGAGTTTATG AGTGATGCCC AAGTGGCTCA GCTCATCCGG
CAGGATGGCA TTGATATTTT GGTGGATTTG GCGGGCCACA CCGCTAAAAA TCGGTTGGCC
CTGTTTGCTT GGAAACCGGC CCCCATTCAG GTCACATGGC TGGGCTATTC GGCCACCACA
GGGGTGAGCC AGATAGACTA TATTATGGGT GATCCTTACA CCTTGCGTGC CCATGAGGCC
GCCCACTACG TGGAAAAAAT GTGGCAGCTA CCCCATAGTC ATCTCTGTTT TACCCCGCCC
GATCTTGAGC TAGAGGTCAA TGCTCTACCA GCCTTGCAGC AGGGCTTTGT GACCTTTGGC
TGTTTTAACA AGCTTACCAA AATCAACGAT GAGGTACTAA GCTGCTGGGC GGAGATTCTT
CAGCGATTAC CGAGCAGCCG TCTTTACCTT AAACAGGGGA TCTATGCCAA TGCTGAGGTT
GCCCAGCAGC TCTACGCCCG TTTTCAGGCC CTAGGCATTG GCGCAGAGCG GTTGATTTTG
GAGGGGGGAT CGGATCGAGA GGGGTATTTT CGCTGTTATC ATCGGGTGGA TATGGCGTTG
GACCCCTTTC CCTTTCCGGG TGGTACCACC AGTGTCGAAG GGTTATGGAT GGGGGTACCC
CTGGTAACCT TGCAGGGCAA CCGCTTTATG GCTCACCAAG GGGAGAGTAT TCTTCAGCAT
GCCGGGTTGG CCCACTGGAT CGCCCAAGAT CGCCACGCCT ATGTGGAGAA GGTGATCGCC
TTTGCCAAGG ATCTGCCCGC CTTGGCCCAA CTGCGACACG GTTTGCGCCA GCAGGTGCTG
GCTTCCCCCC TGTTTGATGC GCCCTTAATG GCCACAGATC TGATGCAGGC TTGGGAGCAG
ATGTGGCAGA TCTACCAAAA TGGCCGCTAA
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| Protein sequence | MTVQNPSSVP AFTQAMHHLQ QGQTAQAMVL FQDVPAGDPG FVTAQLNLGI HAHYQQQWQE
AEQYYKGVLA LAPQHPQCQQ QLFILYKTLQ REQPAQQLMQ HLLAATHGDP LLWQQWAETL
AHYGEVNGAL SCWAHAYRLQ PDNPQPLRAM AQRLEQQGRI QEATEQLQQL AQMLPEDLDL
LLHLVGLLKQ IGKHTAAEAY LRQRLVEHPQ SQPLRFALAN LLMDQGNLAE AETLFRQNLP
DHLLSQLNLG VIYGRQGRYT EALHLFRHAN AVTPNHLFTG YNLAVLCLQI GQLDEAQALL
EQAIAHHPQQ VALRNTLGQV YARQLKFTQA IQCFHAALQQ QPQCESYLQL GTLYRNSAQL
AEAKQCNDQA VLLDPENLEA RTHQLFLAHY LPDAHQAQML AQARAFGQLV AGRAKPFAHA
VPASPPKPLR VGLVSPDLRG HPVGYFLESI VHAMDGQRIM LCAYNSGPPG DALTQRLQSR
MAHWRDIEFM SDAQVAQLIR QDGIDILVDL AGHTAKNRLA LFAWKPAPIQ VTWLGYSATT
GVSQIDYIMG DPYTLRAHEA AHYVEKMWQL PHSHLCFTPP DLELEVNALP ALQQGFVTFG
CFNKLTKIND EVLSCWAEIL QRLPSSRLYL KQGIYANAEV AQQLYARFQA LGIGAERLIL
EGGSDREGYF RCYHRVDMAL DPFPFPGGTT SVEGLWMGVP LVTLQGNRFM AHQGESILQH
AGLAHWIAQD RHAYVEKVIA FAKDLPALAQ LRHGLRQQVL ASPLFDAPLM ATDLMQAWEQ
MWQIYQNGR
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