| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0189 |
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| Symbol | |
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| ID | 4483470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 205704 |
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| End bp | 206516 |
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| Gene Length | 813 bp |
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| Protein Length | 270 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639720934 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_864122 |
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| Protein GI | 117923505 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.0519081 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATGC GACGGGGTGG TCATCTCCTT ATGCGGGGGG TTGTAGTGGC GGGTATGGCA
TTGGTTGTGG TTATGCCCAT ACGGGGTCAG GCGGCCACCC GTCAGGAGGT TAAGGAGATG
GTGGTACAGG AGGCGATGCG CCAGGATGTA CCGTCGACGT TAGCGTTAGC GGTTGCCAAG
GTGGGCTCTG ATTTTCAGGG GTTGGCGCAG AGCAAGCAGG ATGCGCAGGG TGTGATGCAG
TTACCGCCCA ATTTGGTTGA GCGTTTGATG GTACGTGTGA CGGATTTGAG TCAGGATCAG
TTGCAGCGAC CGCAGGTCAA CATACGTTAT GGTGTGACCT ATTTAAAATT ATTGCTCAAG
CAGTATGGGG AGAATTGGGA GAAGGCGTTA TTGCACTATT TAAGTGGTGA GCGGCCAGAT
CGTGTTTCTG GTGGGATGGT GTTGGAGAAG GAGCAGGAGA CTGTTTTGAG CATGCTGCGT
TGGGAGAAGC GGTATCGGGA TCAGATGTCG GTTTGGCAGG CTGCGACGGG GGTTGAGGTT
GAGAAGTTGA CGGAGCAGGT TAGTGTGTTA AGTCGTGATT TGCGGGCGGC TCGTGAGCAG
AGTCGGGTTG AGGATGAGGA TTGGTATGCA CCACCGCCGT CTATGCGGGG GCGTCGTGGT
CCGCCGGGGC ATCGGCATGG TTTTAGGGGG CGGGGGTCTC ATCCGCATCC GCCACCGCCG
CCGCATTGGC GGGGGGGGGC TGCTGGGGAT GCTGCGGATT TTTGGTATGG ATCGGGTTTG
AAGGGTGGGC GAGCTGGGAT GCAGTGGAAT TAG
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| Protein sequence | MKMRRGGHLL MRGVVVAGMA LVVVMPIRGQ AATRQEVKEM VVQEAMRQDV PSTLALAVAK
VGSDFQGLAQ SKQDAQGVMQ LPPNLVERLM VRVTDLSQDQ LQRPQVNIRY GVTYLKLLLK
QYGENWEKAL LHYLSGERPD RVSGGMVLEK EQETVLSMLR WEKRYRDQMS VWQAATGVEV
EKLTEQVSVL SRDLRAAREQ SRVEDEDWYA PPPSMRGRRG PPGHRHGFRG RGSHPHPPPP
PHWRGGAAGD AADFWYGSGL KGGRAGMQWN
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