| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0187 |
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| Symbol | |
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| ID | 4483468 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | - |
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| Start bp | 204404 |
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| End bp | 204901 |
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| Gene Length | 498 bp |
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| Protein Length | 165 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 639720932 |
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| Product | lytic transglycosylase, catalytic |
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| Protein accession | YP_864120 |
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| Protein GI | 117923503 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0741] Soluble lytic murein transglycosylase and related regulatory proteins (some contain LysM/invasin domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.0753643 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCGGT CACTCCTTAT CCTTATTTGC TTGATGTTTA GCTTCAGCCA GCCTCTATTA
GCCAGCCCTA AACAACAGCG CCAACAGATT CAACAATTGA TTATTGAAGA GGCCAAAAAC
CTGAACATCC CCATCTCTTT GGCCTTGGCG GTGGCTCATG TCGAGTCCTA TTTTGATCCC
CAGGTTGAGA GTCACAAGGG GGCTTGTGGT GTTATGCAGA TTATGCCTGC TACCGCCATG
GGGGAGTATG GCATACCCAA AAACATGCTT TGGAACCCTA AGATTAATGT GCGCCTTGGC
CTACACTTTC TACAACGTCT CTTACAACGC TATAAGGGAC GTGTTAATCT GGCGTTATCC
TATTACAATG GGGGTTCCCG GGTTGGGGAT TTGCCCCACG CGCATATTAT TCCTGCAACC
CGACCCTATG TTGCCAAAGT TCGCCATTGG CAAAAACAGT ATCAATATAA ACTCTACCAT
GGGTTGGATC TGTTATGA
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| Protein sequence | MIRSLLILIC LMFSFSQPLL ASPKQQRQQI QQLIIEEAKN LNIPISLALA VAHVESYFDP
QVESHKGACG VMQIMPATAM GEYGIPKNML WNPKINVRLG LHFLQRLLQR YKGRVNLALS
YYNGGSRVGD LPHAHIIPAT RPYVAKVRHW QKQYQYKLYH GLDLL
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