| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmc1_0148 |
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| Symbol | |
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| ID | 4481002 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Magnetococcus sp. MC-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008576 |
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| Strand | + |
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| Start bp | 158901 |
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| End bp | 159929 |
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| Gene Length | 1029 bp |
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| Protein Length | 342 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639720893 |
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| Product | polysaccharide deacetylase |
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| Protein accession | YP_864081 |
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| Protein GI | 117923464 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.577134 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCCATG ATGGTGCTCA AACGCCCCTT GTTGACCCCC AACCACAGGC CCACGCATCT
ATGCTTAGCA CCCTGCACAT TGTGATGTAT CACTATGTTC GCCCCCTACG GCAGAGCCGC
TATCCAGCGA TAAAAGGCTT GGAAAAAGAG GCGTTTTTAG GCCAACTGGA TTATATTCAG
CGGCACTATC AGGTGATTGG TATGGAGCAA TTGGCGGCGG CGTTGGTCGG TGCGGAACCC
CTACCACCGC GTAGTGCCCT GCTGACCTTT GACGATGGGT ATTTGGATCA CTATCTGCAT
GTTTTCCCGC ACTTGCTGGC GCGGGGTTTG ACGGCGGCTT TTTTCCCACC GGTCTGTGCG
GTGGAGCGGC GTCAACTGCT GGATGTCAAC AAGATCCACT TTATTCTAGC CAGTGTTGCC
GACCAGGACC GACTGATAAG CGCCCTTAAT CAGGCCATTG AAGCGGCCTC CGCACACTAT
GGGTTGGCGT CAGTTGCACA CTATGAGGCC ACCTGGAAAA AGCCCTTTGG CTATGACACC
GCCCAGGTCA TCTATTTTAA GCGCATGCTC CAGCATGTCT TGCCTCAGGC CCTGCGTCAG
CAGATAACCC ACGACCTGTT TAGCCAGTTT GTCACGCAGG ATGAAACCGC CTTTGCCCAT
GAACTCTACA TGGATAGCGC CCAGCTACGG GTGATGATTC AAGGGGGCAT GCATGTGGGG
GGACATGGGG ATGCCCACCA CTGGCTCAAC CATCTGGATG CAGAGGCGGC GCGTCAAGAT
ATTCAAAAGA CCCGGAGCTT TCTGGATGAT CTAGGGGCCA GCACACCAAT CGCCAGCTTC
TGTTATCCCT ACGGGGGGTA TAATGCCACA ACCCAGCAAC TGTTACAGGA GTATGGTTTC
AGCGTGGCGG TAACCACAGA ACCCCTCGGG GTGGATCTTG GCCGTGATAC CGCCCTGAGC
CTGCCACGGC TGGACACCAA TGTGTTGCCC CGTCAGGGTG ACGCCGACTA CCTCCAACTC
GCCCCCTAA
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| Protein sequence | MRHDGAQTPL VDPQPQAHAS MLSTLHIVMY HYVRPLRQSR YPAIKGLEKE AFLGQLDYIQ
RHYQVIGMEQ LAAALVGAEP LPPRSALLTF DDGYLDHYLH VFPHLLARGL TAAFFPPVCA
VERRQLLDVN KIHFILASVA DQDRLISALN QAIEAASAHY GLASVAHYEA TWKKPFGYDT
AQVIYFKRML QHVLPQALRQ QITHDLFSQF VTQDETAFAH ELYMDSAQLR VMIQGGMHVG
GHGDAHHWLN HLDAEAARQD IQKTRSFLDD LGASTPIASF CYPYGGYNAT TQQLLQEYGF
SVAVTTEPLG VDLGRDTALS LPRLDTNVLP RQGDADYLQL AP
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