Gene Mmc1_0140 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmc1_0140 
Symbol 
ID4480994 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMagnetococcus sp. MC-1 
KingdomBacteria 
Replicon accessionNC_008576 
Strand
Start bp149649 
End bp150197 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content59% 
IMG OID639720885 
Producthypothetical protein 
Protein accessionYP_864073 
Protein GI117923456 
COG category[R] General function prediction only 
COG ID[COG2969] Stringent starvation protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000284712 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAACCA CCGATCAACC CAGCAAGCCC GACATTATCC GCTATCTGTT GGAACAGGAG 
GGGCGCGTCA TGCTCTGTGT GGATGCCACC CAGGAGCGGG TTGAGGTGCC ACGCCGTTTT
GCCAATGATA ACAGTCTGCG GCTGGTGCTT AATCGACAGA TGCCACAGAC CATCCATGTG
GGTGAGGATG CGCTGGAGTC TGAGCTGCGC TTTGGGGGGA TTCCCCACTA CTGCATCATC
CCCTATGAGA CCCTGTGGGG GGCCTTTAAT CCCGATACCG GCCATGGCAT GTTGTGGCCC
GATACCATGC CTAACGAGGT GCGCCAAAAT TATTGGCTCT CCCAGGCGTT GCGTCAGGAG
GGTGGCTTTG AGATGCCCGA AGGGGCGCTT AAACAGCTAC AAAAGCTGCG CGAAGAGCAG
GCGGCGGCCA GTGGGCGCCC TCAGTTACAG GTGGTGCCCA GTGATGGCCC AGCCAGCCCG
CCCGCTCACC CAACCGATCA AGAGCCCCCA CCAGAACGGC GCAAACCCAC CCTGCGTTTG
GTGAAATAA
 
Protein sequence
MVTTDQPSKP DIIRYLLEQE GRVMLCVDAT QERVEVPRRF ANDNSLRLVL NRQMPQTIHV 
GEDALESELR FGGIPHYCII PYETLWGAFN PDTGHGMLWP DTMPNEVRQN YWLSQALRQE
GGFEMPEGAL KQLQKLREEQ AAASGRPQLQ VVPSDGPASP PAHPTDQEPP PERRKPTLRL
VK