| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4387 |
|---|
| Symbol | |
|---|
| ID | 4476015 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008573 |
|---|
| Strand | - |
|---|
| Start bp | 274941 |
|---|
| End bp | 275921 |
|---|
| Gene Length | 981 bp |
|---|
| Protein Length | 326 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639720742 |
|---|
| Product | peptidase M56, BlaR1 |
|---|
| Protein accession | YP_863900 |
|---|
| Protein GI | 117676324 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG4219] Antirepressor regulating drug resistance, predicted signal transduction N-terminal membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 17 |
|---|
| Fosmid unclonability p-value | 0.567369 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTTG GCGATTTAGC GATAGCACTA AATTTATTGA GTGTTGCAGT GCTGGCATTT
GCTATCAGTG TTGCGTGCAT CTCGATCGCC CTACGATTAA CTTTGCCAAG ATTCGAGCAT
CTTACTTTTA GGTTACGTAA AGTTATCCTA TGGGCTTTGG TTACTGTACC TTGGTGGGTA
GCCATAAGCT GTGCTGCCTT TTTCTGGCCA AGGCAGCAAG AGTTGTTTTC TACTGCTTGG
TTAAATGAAT TCGCTCATTG GCATCACGTC GACATCTTTA GCTTCAGCAG TTGGCATGCT
TTTACCTTGT TGTCGGCCTT CGGTTATTTG ATATGGTCGA TGATCTCGAC CATTTATGTA
CGTAAAAAGC AATCATCAAC AATGGCATCT CTGATTGGAT TATCAGAGAT CCAACCTCAG
GTGACTATAA CTCAGCAGCG CTATTATTCG TTAGCACAAG CAATTCCTGC GGCCTTCACC
ACAGGTCTAG TGTCCCCTAA GATTTACCTG ACCACAGGAT TGCAAGAAAA GGTTACAGAA
CAGCAACTCG ATATTATTGT TCGACATGAA ATGGCGCATG TCGTGGCTCG AGACCCTTTA
TTTAAAGTCA TCTTTGCTGC ATTTGCTGGT TTTTATCCGA AAGCGGCCAA ACGCAATTTA
ATCGGACATT TTACCCTGTT GACTGAACAG CTTGCAGATC ATGCTGTGAC CACTGAGCAT
GACAATCTAG ATGTCGCTCA AGCCTTGATA AATGTAGCTC GAATGCAGCG AAGCGTAACT
CTTGGTTGTG ATGGTTTACA GACAAGTTAT TTCGGTAACG ATCAAACCAG TGTTCGAGTA
CAGCGACTGA TTCAACCTAG GTTAACGTCT TCCCGATTGG CGATCGGTTT AACGTTGTTA
TTCTTAGCCA TCGTCCCACT TTTAACCGCT TCAACTGTCG ATAGCCTTCA CCACATTATC
GAAACCTTCT TCACCCATTA A
|
|---|
| Protein sequence | MFVGDLAIAL NLLSVAVLAF AISVACISIA LRLTLPRFEH LTFRLRKVIL WALVTVPWWV
AISCAAFFWP RQQELFSTAW LNEFAHWHHV DIFSFSSWHA FTLLSAFGYL IWSMISTIYV
RKKQSSTMAS LIGLSEIQPQ VTITQQRYYS LAQAIPAAFT TGLVSPKIYL TTGLQEKVTE
QQLDIIVRHE MAHVVARDPL FKVIFAAFAG FYPKAAKRNL IGHFTLLTEQ LADHAVTTEH
DNLDVAQALI NVARMQRSVT LGCDGLQTSY FGNDQTSVRV QRLIQPRLTS SRLAIGLTLL
FLAIVPLLTA STVDSLHHII ETFFTH
|
|---|
| |