Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shewana3_4356 |
Symbol | |
ID | 4476051 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella sp. ANA-3 |
Kingdom | Bacteria |
Replicon accession | NC_008573 |
Strand | + |
Start bp | 241909 |
End bp | 242253 |
Gene Length | 345 bp |
Protein Length | 114 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 639720711 |
Product | XRE family transcriptional regulator |
Protein accession | YP_863869 |
Protein GI | 117676293 |
COG category | [K] Transcription |
COG ID | [COG1396] Predicted transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.623586 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCTGACA AACTTCAGCA AGCCGCACTT ATCAGCAAAA ACATAAAGCA CATGCGAGAA TTACTTGGCT GGACACAGGC AAGGCTCGCT AGCGAAGCTG GGATAACAGC GGCAGCACTG AGCATGATCG AAAAGGACGA AGGCCGAATG CCAACTATTG TTGTGCTGAG GAAAATCGCT TCGGCATTGG GTGTTAAACC TTATGAAATA ACAGGAGAAG ATGCACCAGA AGATTCTGGA GATAAAACGA TTGAGTTCTA CCGAAAATGG GGAGAACTTG ATAAGCTGCC AGAACAGGAT CAGCGTATAT TGCGAGAAAT GATGGAACGC TTCACCAAGA AGTAA
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Protein sequence | MADKLQQAAL ISKNIKHMRE LLGWTQARLA SEAGITAAAL SMIEKDEGRM PTIVVLRKIA SALGVKPYEI TGEDAPEDSG DKTIEFYRKW GELDKLPEQD QRILREMMER FTKK
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