Gene Shewana3_4356 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4356 
Symbol 
ID4476051 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp241909 
End bp242253 
Gene Length345 bp 
Protein Length114 aa 
Translation table11 
GC content46% 
IMG OID639720711 
ProductXRE family transcriptional regulator 
Protein accessionYP_863869 
Protein GI117676293 
COG category[K] Transcription 
COG ID[COG1396] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.623586 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGACA AACTTCAGCA AGCCGCACTT ATCAGCAAAA ACATAAAGCA CATGCGAGAA 
TTACTTGGCT GGACACAGGC AAGGCTCGCT AGCGAAGCTG GGATAACAGC GGCAGCACTG
AGCATGATCG AAAAGGACGA AGGCCGAATG CCAACTATTG TTGTGCTGAG GAAAATCGCT
TCGGCATTGG GTGTTAAACC TTATGAAATA ACAGGAGAAG ATGCACCAGA AGATTCTGGA
GATAAAACGA TTGAGTTCTA CCGAAAATGG GGAGAACTTG ATAAGCTGCC AGAACAGGAT
CAGCGTATAT TGCGAGAAAT GATGGAACGC TTCACCAAGA AGTAA
 
Protein sequence
MADKLQQAAL ISKNIKHMRE LLGWTQARLA SEAGITAAAL SMIEKDEGRM PTIVVLRKIA 
SALGVKPYEI TGEDAPEDSG DKTIEFYRKW GELDKLPEQD QRILREMMER FTKK