| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4336 |
|---|
| Symbol | |
|---|
| ID | 4476066 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008573 |
|---|
| Strand | + |
|---|
| Start bp | 224184 |
|---|
| End bp | 225119 |
|---|
| Gene Length | 936 bp |
|---|
| Protein Length | 311 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 639720691 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_863849 |
|---|
| Protein GI | 117676273 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGATGTTC TCAGTGAAAT TTTAGATAAG GTAGAGCTTA CTAGCAGCTA CTGGTATAGA
ACCTCATTTG CGGGAGACTG GGGCATCAGC CTCCCGCAGG AAGAGAATCT AGCGAGATTT
CACATCGTGA CTCATGGCGA GTTTTGGTAT GAGGTGCCAA AACTTAAACT TAAAGCATTG
GCGGAGCAGG GCGATATTTT GATCTTTTTC AAAGGGATGG AGCACACCAT GGCCAGTGCA
CCAAAAATCA AGGCCGAGCC TGCGGTCGAA TTTAGAGCTA AAGCCAACCT CACCGAAGCT
CAAGTTTTGG AATACGGTGA TCAGAGCAAG CTCAAAGCCA ACGTCGTTTG CGGACATTTT
TGTTTTAATG GCGGACCCGA TCATCCATTC TTAAATTCGC TGCCAAATGT CGTGCATATC
AAGAGTGCTG ATAACTCCCA CTCGCCTTGG CTTGCCATGC TTTTAAGTAT TATAGAGCAG
GAAGCAAAAT CAGGGCTTCC TGGAAGCAAC ACGTTAGTCA GAAAGCTGAC CGAAATTATC
TTCGTGCAAG CGTTAAGAAT CCACATGTAC AAATCCAATA AAAATGCTGG ATTCTTCAAA
CTGATCGAAA ATCCGCAACT CAGCAAAACC TTGGAAGCTA TTCATCATAG TCTCGATAAA
AAATGGGGTC TTGACGATCT CGCCGGGATT GCGGGGATGT CGCGTACGAA CTACAGCGTC
AAATTTAAGG AGCTGTCAGG CATGACACCT CTTGATTATT TAACCTATTG TCGGCTTGAA
AAAGCAAAGC AGCTGCTTAA AGAATCCGGT AAGTCTGTTC CCGAAGTGAG TGAAGCCATT
GGGTATCCGG CACATGAACA CTTTCAAAAG TTGTTTAAGA AAAAAATTGG CAAAACTCCT
AGCGCGTACA GAAAAGAAAA TTCTGAAAAG GTGTAA
|
|---|
| Protein sequence | MDVLSEILDK VELTSSYWYR TSFAGDWGIS LPQEENLARF HIVTHGEFWY EVPKLKLKAL
AEQGDILIFF KGMEHTMASA PKIKAEPAVE FRAKANLTEA QVLEYGDQSK LKANVVCGHF
CFNGGPDHPF LNSLPNVVHI KSADNSHSPW LAMLLSIIEQ EAKSGLPGSN TLVRKLTEII
FVQALRIHMY KSNKNAGFFK LIENPQLSKT LEAIHHSLDK KWGLDDLAGI AGMSRTNYSV
KFKELSGMTP LDYLTYCRLE KAKQLLKESG KSVPEVSEAI GYPAHEHFQK LFKKKIGKTP
SAYRKENSEK V
|
|---|
| |