| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4327 |
|---|
| Symbol | |
|---|
| ID | 4476057 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella sp. ANA-3 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008573 |
|---|
| Strand | - |
|---|
| Start bp | 216272 |
|---|
| End bp | 216787 |
|---|
| Gene Length | 516 bp |
|---|
| Protein Length | 171 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 41% |
|---|
| IMG OID | 639720682 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_863840 |
|---|
| Protein GI | 117676264 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3059] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 0.705923 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 36 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTATTC CCGAAATTGA AAATGGTGTC CAGACTACCA ATATCCTTAG TAATAATCTC
GGTGCAAAAG TCACTAAGTT TGGTATAGGT GGCATCTACG TTGCCATGAC GATAATATAT
TTGTGGTTTG GTGGTATGAA ATTCACTAGC TACGAAGCAA ACGGTATACA TGGTTTTGTT
AGTAATAGCC CTCTGCTTTC ATGGATGTAT AGTTTCCTCA GCATTCAAGG ATTCTCAAAT
TTTCTGGGTG TGCTTGAAAT TTCAGTTGGC CTGTTAATCG CTGCACGAGT TTTCTCCCCT
AAGCTCGCAA TCTTGGGCGG TGTACTTTCA ACCGGACTCT TTTTTACGAC ATTGTCGTTC
ATGCTGACTA CACCCGGTGT TTTTGAGGCA TCTCTTGGGT TTCCTGCGAT CTCTGTGGTT
CCTGGCCAGT TTTTGCTAAA AGATTTAGGC TTGTTTGTCG TGTCTATATT TATCGTAGGC
ACATCACTTA CAGCACTGGA GCACAAAAAC AAATAA
|
|---|
| Protein sequence | MTIPEIENGV QTTNILSNNL GAKVTKFGIG GIYVAMTIIY LWFGGMKFTS YEANGIHGFV
SNSPLLSWMY SFLSIQGFSN FLGVLEISVG LLIAARVFSP KLAILGGVLS TGLFFTTLSF
MLTTPGVFEA SLGFPAISVV PGQFLLKDLG LFVVSIFIVG TSLTALEHKN K
|
|---|
| |