Gene Shewana3_4290 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4290 
Symbol 
ID4475944 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008573 
Strand
Start bp173365 
End bp174261 
Gene Length897 bp 
Protein Length298 aa 
Translation table11 
GC content41% 
IMG OID639720647 
Productcopper resistance D domain-containing protein 
Protein accessionYP_863805 
Protein GI117676229 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG1276] Putative copper export protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value0.180937 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.688919 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATATTAA CCGTATTTGA AATATCGGTG TTGATATCTA AATGGGTTAT CTATCTGAGT 
GTTGCCGCTG TTATTGGCGG CACATTGATG CAATACCTCA TTAAGGGTCA ACTTAATCTG
AGCATTAGCG TTGCAAAATA TACCGGCCTA GGTGCCGTAT TGGGATTGAT TGCCGTTAGT
ATCAATTATT TTGCGCAAGT AGGGGCTTTT GCTGAAAACG GCTTGATGGG AATATTTGAT
GCGCAGATGC ATGCTTTTCT GTGGCCAACC CAGGTAGGGC AAACGGTGCT TTGGCGCTTA
ATCGGTTTTG GGTTAATGCT AGTGGCTAGT GGTTTACTGT TACATAAGAA CCGTTATATC
AAAACGTTTT CTGCGGTATT AGCGATTCTC AGTTGTCTGT TAATTGCTGT CACGTTTACT
TTTATTGGCC ATAGCACCGA ACTGGGATTG CTTGCTCAAG GCTTAATATT GATACACGTG
TTGATCATTG GCAGTTGGAT AGGCGCTTTT TATCCATTAT GGAAATTATG CTGCACCGAT
GACCACATCG TCATAAAAAA TGTCATGGAT ACATTTGGTC GTTTAGGCAT AGTGATTGTC
ATTCTAGTGT TGCTTTCAGG CATGGGAATG GTGTGGATGT TGTTTGATAG TCCCACTGAA
TTAATCAGTT CCGATTATGG TATTGCGGTC ACCATCAAGC TCTGTTTGGT GGCTATCATT
TTGCTTATAG CAGCATGGCA TAAATTGGTT TTAGTACCTA AATTAACGAT TGCGAACACA
TTACTCGCAA AACAAAAACT ACAAAAATCG ATTGGATTAG AAGCATTAAT AGCAGTACTG
ATATTAGCGA CAACAGCGGT ACTTTCGAGC GTGCTAGGTC CTATGAGCCT TGGATAA
 
Protein sequence
MILTVFEISV LISKWVIYLS VAAVIGGTLM QYLIKGQLNL SISVAKYTGL GAVLGLIAVS 
INYFAQVGAF AENGLMGIFD AQMHAFLWPT QVGQTVLWRL IGFGLMLVAS GLLLHKNRYI
KTFSAVLAIL SCLLIAVTFT FIGHSTELGL LAQGLILIHV LIIGSWIGAF YPLWKLCCTD
DHIVIKNVMD TFGRLGIVIV ILVLLSGMGM VWMLFDSPTE LISSDYGIAV TIKLCLVAII
LLIAAWHKLV LVPKLTIANT LLAKQKLQKS IGLEALIAVL ILATTAVLSS VLGPMSLG