| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4258 |
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| Symbol | |
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| ID | 4475851 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008573 |
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| Strand | - |
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| Start bp | 134681 |
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| End bp | 136039 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 639720615 |
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| Product | TraB pilus assembly family protein |
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| Protein accession | YP_863773 |
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| Protein GI | 117676197 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.346298 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.0301907 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAAGCGT TACAGGATTT AAAAACCAAG TGGCTTGCGC TTCCATCGAA TCAGCGCACT
ATCGCGTTAA TCGTGATATT GGCAATACCT GCTTATCTTG TGGCTGAAGC CATTTTCCCT
TCAGCGCCGA AAACCCCTGT CAGCTCAATC CCAGCCAGAG CGAAGCCTAT GTTTATGAGT
ACCATGGGGA GCGAGCGCTT GGAGTCCACC CAGACTTCCG GCCAGCTCAT AGCTATGCGA
AAGAAAATTC AAGAGCGTGA AAAAGCGATT GATGCACAGT ACACCGAGCA AAAAGCTAGT
GAAAAGCGAA TTCAGCAACA GGTCGATACC CTGCAAATGT CTCAGCTTGA ATCACAAAAA
CGCCTCGAGA CCATCGCGCA TCAAATGCAA ATGCTGGTTG AACAACAAAG CAAAAATGCC
GCAACAGCTC GAGACAGTGT GAGCGCGAAA GGAGCTCGAC CAGAAAATAT CGCCCAGCAA
GCACCTTCAT TGCCAAGTAC CGAGTTTAGC CTAGACCCAA TGGCAAGCCT TAAGTCGAAT
GTCGCCATGA CCCCGCCAGC GTCAAAGACT TTAACCATGA ACCGTGGTGA CGTGAGTTTA
GGTAAGGCCG CTGCCACAGG TGATGAAGCA AATGTTGGTA ATGCGTCAAC AGCCAAAAAC
CAAGTCGCAG CCAAAGCAAA ACAAGCGATT TCTCAAGAGA ACACAGGTTC TATCAAGAAA
ACTGAAAAAG AGCCTGAGAC ATGGTTGTCA GCTGGCACAG TAATACCAAC CGTCTTGCTT
ACGGGTCAAC ATGTACCTAC CAGTTCATCG GCGCAATCAA ACCCAGCTCC AGTGTTATTA
AAAATCGTAG ACGTTGGGGT GATGCCTAAC GGTTTCACTA TCGATCTAGT GGGTTGCACA
GTGATTGGCG CGGCCCGTGG TAGTGCCAGT ACCCGTCGTG TCGAAATCCG CGCTGAGAGT
ATCAGCTGTA TCGACCAGAG AGGTCGTGCG ATTGAACAGC CGTTCATTGC CGCAGTGCAA
GGTCAAGACG GTCATAGCGG TATCCCAGCC AAGTTAGTAA CACTCTACGG TGAAGTGGTG
AAGCAATCCT TCTGGGCAGG CATCTATGGC ACTGGCGCCC AAACCCTCAC ACAAGCCGCG
ACCAATCGAG TGTCTGGTGA TGTGGTTTAT GACGGCACCT ATTTCAAAAA CACGGCGACC
AGCTCACTTG CTGGTGGCTC AAGTACCGCA TTCGATAAGA TTGCTGACTT CTACCTGCAG
TTAGCCGACG AAGCCAGGCC GTATCTGGAA ATGCACGGCG GCATTGAAGG TGTTGACCTC
ATTGTTCAAC GCGGTGTTAG TCTCAAATAT AAGGGTTAA
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| Protein sequence | MQALQDLKTK WLALPSNQRT IALIVILAIP AYLVAEAIFP SAPKTPVSSI PARAKPMFMS
TMGSERLEST QTSGQLIAMR KKIQEREKAI DAQYTEQKAS EKRIQQQVDT LQMSQLESQK
RLETIAHQMQ MLVEQQSKNA ATARDSVSAK GARPENIAQQ APSLPSTEFS LDPMASLKSN
VAMTPPASKT LTMNRGDVSL GKAAATGDEA NVGNASTAKN QVAAKAKQAI SQENTGSIKK
TEKEPETWLS AGTVIPTVLL TGQHVPTSSS AQSNPAPVLL KIVDVGVMPN GFTIDLVGCT
VIGAARGSAS TRRVEIRAES ISCIDQRGRA IEQPFIAAVQ GQDGHSGIPA KLVTLYGEVV
KQSFWAGIYG TGAQTLTQAA TNRVSGDVVY DGTYFKNTAT SSLAGGSSTA FDKIADFYLQ
LADEARPYLE MHGGIEGVDL IVQRGVSLKY KG
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