| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_4005 |
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| Symbol | |
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| ID | 4457651 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4861324 |
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| End bp | 4863183 |
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| Gene Length | 1860 bp |
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| Protein Length | 619 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 639704776 |
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| Product | peptidase C1A, papain |
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| Protein accession | YP_848106 |
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| Protein GI | 116751419 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4870] Cysteine protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGGTGCCG GGGAGGGGAG TATGCACTTG AAACGACTTG CTGTGGCTTG TTTCGCGTTG
TTTTATGCCA CGTTTTTCGG TAGCGCAGGT GCGTTTGCCG AAGAACTGGC CGATGTGCAG
AAAAGAATAA AAGACAGGAA TCTCAAGTGG GTTGCTGAGC GACACCTCAA CCCCGAAAGG
AAGGGACTCG GACTCCTCAG GGACGGGTTC ACCGCCGCCG TCCCGCCTGC CGAAGGTGCA
GGCGATGTTC CCACAGGCCT GGCGACCGCC GTGGACTGGC GAAATATCGG CGCCGACAAC
GCGTTCGGGG TTGCCCCGGG CAACTACGTG TCCCGCGTGA AGAACCAGGG GAGCTGCGGC
AGTTGCTGGG CTTTCGCAAC GACGGCAATC CTTGAGTCCG CGACCCAGAT CGCCAACAAC
GATCCGATCG AACCCCTTGA TCCCGGCAGT GCCTACGATC TGTCCGAGCA GGTCATGCTC
ACCTGCAGCG GCGCCGGCAG CTGCAACGGC GGGTACGTCA CCACGGCCTC GAGCTATGCA
GCCACCACGG GATTGCTGCG GGAATTCCCC TCCGGTTGTT ACGCCTACAA CATCGGCAGC
ACAACCTGCC CCAACCCGGG TTCCTACCCC GACTGCGATC AAACCCGCTT CCGGATCGAC
GCCTGGAGCG GGGTATCGGC CACCGTCGAT GCGATGAAGA ACGCCCTGAA CACCCATGGC
CCTCTCGTGG CGACCTACGC GGTCTACAAT GACTTCTACC GCTACTACGG CAGCGGCATT
TACGAGGCCA TTTCCTGCGA TCAAACGGTC AACCCCCTCG TGGGCTATCA CGCGGTGGCG
CTGGTGGGCT ATCGGGATGC CGATGCCGCC GACCCGGTGG GGTATTTCAT CGTGAAGAAC
AGCTGGGGAG CCGCGTGGGG TGAATCGGGG TATTTCAGAA TCGCCTACTC TCAGGTCGGC
AACTGCGTGA AATTCGGGGG GACCACCCTG GCGTACTCCA AGACGGCCTG CAACGGGGCC
ATCACCGTGG ATTCTCCGGC CGAATCGGCC ACCTTGCAGG CGGGAACGAT GCACGCCATC
ACCTGGAGCG ACTCGGGGAG CATCGGCCCG TACGCGAGTA TCGATCTCTA CCAGGCAGGG
AATCGCGTCC GGACGATCCA GGCAAATGCC CTCCTGGCGG ATGGATCATT CTCGTGGCTG
GTCGACTCCG ATCTTCAGGG GCCGAACTTT TCGGTAATGG TCACGAGCAC GGCATGCAGT
TCCGCCTACG GCACGAGCGG ACCGTTTTCC ATCAACCCGG CGGCGGATTT CGAAGTGGCC
GGCACGGCGG TTTCCGGCAG TGTGGGACTT TCGGGAGTGA CCATCAGTTT CAGCAGAGTT
TCCGGGGCCG GCACGATCCC CGCCCCTGTC GTCACCGACT TCCAGGGCGG GTGGAGACAA
AGCGGGTTTC AGCAAGGGAC GGAATACCGG GCGACGCCAT CAAAAACGGG CTGCACGTTC
AGCCCGGCGT TCCTGGATTT CACCGATGCA GCGTCCAGCC TGAATTTCGC CGCGACGGAG
AACAAGATAA CCTCCGTCAT ATCTCCGACC GCCGGCTCCA TCGTGAAGGT GGGGGGGGCC
CTGCTCGTCA AGTGGACGTA CACGGGCAGC CCGGGTCCCT ATGTGACCAT CGAGGCCGTG
AACACCGCTA CCGGCGCTCG AACGGCGATC AGTTCCAAGG CCAAGATCGG CACCGGCGGG
ATCGGCTCTT ACAACTGGAG GATCGGCAAG CAGCAGGCGG CAGGGACCTA CCGGATCAAG
GTCGCGAGCA AGACCAACGG TTCCTCGGCG ACGAGCGCGG AATTCAGCAT CATAAAATAG
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| Protein sequence | MGAGEGSMHL KRLAVACFAL FYATFFGSAG AFAEELADVQ KRIKDRNLKW VAERHLNPER
KGLGLLRDGF TAAVPPAEGA GDVPTGLATA VDWRNIGADN AFGVAPGNYV SRVKNQGSCG
SCWAFATTAI LESATQIANN DPIEPLDPGS AYDLSEQVML TCSGAGSCNG GYVTTASSYA
ATTGLLREFP SGCYAYNIGS TTCPNPGSYP DCDQTRFRID AWSGVSATVD AMKNALNTHG
PLVATYAVYN DFYRYYGSGI YEAISCDQTV NPLVGYHAVA LVGYRDADAA DPVGYFIVKN
SWGAAWGESG YFRIAYSQVG NCVKFGGTTL AYSKTACNGA ITVDSPAESA TLQAGTMHAI
TWSDSGSIGP YASIDLYQAG NRVRTIQANA LLADGSFSWL VDSDLQGPNF SVMVTSTACS
SAYGTSGPFS INPAADFEVA GTAVSGSVGL SGVTISFSRV SGAGTIPAPV VTDFQGGWRQ
SGFQQGTEYR ATPSKTGCTF SPAFLDFTDA ASSLNFAATE NKITSVISPT AGSIVKVGGA
LLVKWTYTGS PGPYVTIEAV NTATGARTAI SSKAKIGTGG IGSYNWRIGK QQAAGTYRIK
VASKTNGSSA TSAEFSIIK
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