| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3982 |
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| Symbol | |
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| ID | 4457696 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Syntrophobacter fumaroxidans MPOB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008554 |
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| Strand | + |
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| Start bp | 4832659 |
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| End bp | 4834470 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 639704753 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_848084 |
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| Protein GI | 116751397 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4783] Putative Zn-dependent protease, contains TPR repeats |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCGCCT TGCCACTCGT TTTCGTTGTT CTATTCGCCG TTCCGGTTTT TCCCGATTGG
GCCCAATCCT ATGAAAACCC CATGGAAACG ATCGATTTCT GGCAGCGCCA GTATGAAGAG
ATAAGGCCGG AAACCGATGC TCGGGCAAAG AGAGCGCACG AAATCTTCAG CCGCCTGGTC
AATGCCGTCG GGAGTCGGCC CGGTGTGGTG CCGAGGCTTT TCATCTCGAA GACCGAACCC
AAAAATATTT CTCTCCCCAT AGCCATACCC GATGGGGCGG TCATCATTTC CGGCAGAACC
CTTGACATCT GTTCCGGGAA CACAAAAGCT GCCGATGACC GTCTGGCTTT CGTGCTCGGG
CATGAACTGG CGCATCTGCT CAAAGATGAT TTCTGGCACA TGAAGTTCTT CAACGCCCTG
AAGACGGCAG AAGCCGGGAA CCCGGCCGAT GCGAAGACTC TCGCCGAGCT GAGAGCGATA
GCCGGCTCGA CGGATCAAGT CCTGGCAAAG GAGCTCCAGG CCGATGAGTA TGGGATCATC
TACGCGGCCA TGGCCGGATT CGACACCAGG GCCGTGGTGG ATGACGGTAA GGTCAGCTTC
TTCGTCGAGT GGCTGCAAGC TGTTGACCCG GCCTATTCCG TCAATACGCC CAAGGATCCC
GATCACCCCA CCCCGGAGCA GAGGGCGGGA ACGGTAAAGG CTCGCCTTCG GCAGGTTCTG
AAAAACGTGG AGATGTTCGA ACTGGGGTTG GCGTTTTACC GGACAGGGCA GTATGACCGG
GCGGTTTCCG CATTCAGGAG GTTTCTTGCC TACTTCCCGA GCCGCGAGGT CGCCCACAAT
CTTGCCGCGA GCCACCATCA ACTGGCCATG AAGTATTATG CGGGCAAGGC GGGAGGGGCG
CCCCCCCTTT TCAGAATGTC GGTCGCCATC GATCCGCGGA CCCGGGCCGG CGACATCGCT
CAACGGGGGG CGGAGGATGC CGAGTACCTG TTCAGAGTGC ATCTGAAGGA GGCTATTGAG
TTGTATCAGC GGGCCATCGG CCAGGATCCC GGATACGTCA GGTCATATGA CAATCTGGCC
TGTGCGTTTA TTCTGAGAGG CGAGGAGGGC GATGCGTACA GGGCGGTGGT CATGTTGAAG
GACTCCCTCA GAATTGCCCC GGCTCGAAAA GAGGCGCTGA ACACTCTTGG CGTGGCGTTC
TTCCACACGG AAAACCCCGA GAAAGCCAAA GGCTGTTTCC TCGAGGCACT CAAGATCGAC
CCAGCCTACG ATTTGGCGCT GTATAACCTC GGACGGCTGG CACTGGAACG GGGCGATGAA
AGTGAGTGCA GGAGACACTG GCTGGAATAT CTCAAGCTGG ACAGGAAGAC TCCGTGGGCG
GCCGCGGCAA GGAAAACCCT GGGTGTCGAA GGTCCGGCGG ATTCTTCCCC TCAAGGCGTC
GAACACGAGC GGGAGAACGT ACTGGGCCTT CAGACAGGCG CGTATGACGA GGAAGTCCCA
AAAGACTGGG GGACTCCGGA GACGGAAAAC GTGCCCCTGG AGCGTTATCC CTACAAGATC
AACCGGTTCG CCAACCACCT GATGACCGTC TCGCAGAACA AGGAGATCGG GCTGATCCTG
GCATTCAGGG ATTTTTCCGG AAGAACGGCG AGGAACATCG GCATGGGGAG TTCCAAGCAA
GACGTCGTTG CACGATATGG CGATCCGGAC AGGAACCTGG AGTCCCTGTC GGGATTCACG
CTGGTCTACG AGACATCGGG AATAGCGTTC AATTTTCAGG AAGGCGGACT GGTCTCCTGG
ACTCTGTTCT GA
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| Protein sequence | MRALPLVFVV LFAVPVFPDW AQSYENPMET IDFWQRQYEE IRPETDARAK RAHEIFSRLV
NAVGSRPGVV PRLFISKTEP KNISLPIAIP DGAVIISGRT LDICSGNTKA ADDRLAFVLG
HELAHLLKDD FWHMKFFNAL KTAEAGNPAD AKTLAELRAI AGSTDQVLAK ELQADEYGII
YAAMAGFDTR AVVDDGKVSF FVEWLQAVDP AYSVNTPKDP DHPTPEQRAG TVKARLRQVL
KNVEMFELGL AFYRTGQYDR AVSAFRRFLA YFPSREVAHN LAASHHQLAM KYYAGKAGGA
PPLFRMSVAI DPRTRAGDIA QRGAEDAEYL FRVHLKEAIE LYQRAIGQDP GYVRSYDNLA
CAFILRGEEG DAYRAVVMLK DSLRIAPARK EALNTLGVAF FHTENPEKAK GCFLEALKID
PAYDLALYNL GRLALERGDE SECRRHWLEY LKLDRKTPWA AAARKTLGVE GPADSSPQGV
EHERENVLGL QTGAYDEEVP KDWGTPETEN VPLERYPYKI NRFANHLMTV SQNKEIGLIL
AFRDFSGRTA RNIGMGSSKQ DVVARYGDPD RNLESLSGFT LVYETSGIAF NFQEGGLVSW
TLF
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