Gene Sfum_3970 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3970 
Symbol 
ID4457684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4822982 
End bp4823761 
Gene Length780 bp 
Protein Length259 aa 
Translation table11 
GC content62% 
IMG OID639704741 
Productmethyltransferase type 11 
Protein accessionYP_848072 
Protein GI116751385 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.280033 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.529582 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATCG AAGCCGACCC CGAATGGTGG AAAACGATGT TTGATGAGCT CTATCTCCTC 
ACCGATGCCC GCTCGGTTTG CGATGAGGAG ATCACTCGGC GGGAGGTGGA TCTCATCTGC
CGGTTACTCC CGATCCGCTC GGACCAACGC GTTCTGGACC TGTGCAGCGG CCACGGGCGG
CACAGCCTGG AGTTTTGCGC GCGAGGCTTC AGCCGATGCA TCCTGGTCGA CTACTCCGAA
TACCTGCTCA GATGCGGCCG GTCGCGCGCA CTGGAACGTA ATCACTCGAT GGGCTTCATC
CAGGCCGACG CCAGGAGCAC CGGGCTTGCC TCGGCAAGCT TCGACCACGT GCTGATTCTG
GGAAACTCCT TCGGATATCT GCGCGATGCC GCGGGAGACG GCGAAATCCT GAAGGAAGCC
CACCGTGTGC TCCGTCCCGC CGGCTGGCTG CTGCTCGACC TGGCCGACGG AACAGCCGTC
CGGGAAAAAC TGAGTCCCGA GGCATGGCAC GAGATCGGCC GGGAAATAAT CGTCTGTCGC
CGGCGGGAAG TGGAAGGCGA CACCGTATTC GTCCGTGAAA TGGTCCTGAG CAAGGAAAAA
GGCCTGCTCA GAGACCGCAC CTACGCCATC CGATTCTACG ATCCCGCCCA GATTGCAGCG
TTGCTGAACC GGACCGGATT CGAAAGCGTC AGGGTCCTCA CCGACTTCTC ACCGCACCGC
ACGCCGGGCG ACTACGGATT CATGAACCGT CGCATGATCG CTCTGGGGCG GAAGGTCTGA
 
Protein sequence
MTIEADPEWW KTMFDELYLL TDARSVCDEE ITRREVDLIC RLLPIRSDQR VLDLCSGHGR 
HSLEFCARGF SRCILVDYSE YLLRCGRSRA LERNHSMGFI QADARSTGLA SASFDHVLIL
GNSFGYLRDA AGDGEILKEA HRVLRPAGWL LLDLADGTAV REKLSPEAWH EIGREIIVCR
RREVEGDTVF VREMVLSKEK GLLRDRTYAI RFYDPAQIAA LLNRTGFESV RVLTDFSPHR
TPGDYGFMNR RMIALGRKV