| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3924 |
|---|
| Symbol | |
|---|
| ID | 4457744 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4781711 |
|---|
| End bp | 4782478 |
|---|
| Gene Length | 768 bp |
|---|
| Protein Length | 255 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 59% |
|---|
| IMG OID | 639704697 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_848028 |
|---|
| Protein GI | 116751341 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0730] Predicted permeases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.664588 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.316412 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGGTC AGGCCTGGGC GGCGTTTCCC GCCGGGATGT GCATAGCCAC CATCGTCATG
GTGGTGGGCT TCGGAGGCGG GATCCTGTGG ATGCCTTTCC TGCTGATCGT GCTGCACTTG
CCCACGGATA CCGCAATCAT CACATCCTTG CTGATCCAGA CCGCCGGCAC GGGGTCGGGA
AGCGTTGCCT ACACGCTCCA GAAGAAAACC GACAACCGGC TCGCCCTGCT CATGATGAGC
ATCGCCATTC CGGGAGTCAT CGTCGGCGCT TTTTTTGCCC ACCGCGTCGT TCCTTCCAAT
ATCGAAGTCA TCATTGGCGC GATATCCCTG GCGACGGCCC TGTTGTTCGC TTCTTCCAAC
GAGAAGTTTT CGGAGACGGG AGTGGAGCGT GTGGAGCTCA AACGGGCGGC CGGGCATTCA
TGGATTGCGG TCGTCATGGC CGTCGCCAGC GGCATGCTGA CGCTCAACAT CGCCGAGTGG
CTCATTCCCG TGATGCGGAA CAAGATGGGC CTCAGGATGA GCAATGCCGT CGCCACGTGC
ATCGTGCTCA CCTGCGGGGA ATGTTTTCTC GGCGTGTGGA CTCACTATTT CATGGGTGCG
AAACCGGACT GGGCCGTTGC CCTCTGGGGA ATACCGGGCG TGATCATCGG AGGTCAAATC
GGCCCCAGGC TGGCAAAAGG CATCGATGAG CGCCTGCTCA AAGAGATTTT CATCTTCATG
CTCACACTCA TCGGGGTTCA CCTGGTGTAC AAGTACTTTC CTTTGTGA
|
|---|
| Protein sequence | MIGQAWAAFP AGMCIATIVM VVGFGGGILW MPFLLIVLHL PTDTAIITSL LIQTAGTGSG
SVAYTLQKKT DNRLALLMMS IAIPGVIVGA FFAHRVVPSN IEVIIGAISL ATALLFASSN
EKFSETGVER VELKRAAGHS WIAVVMAVAS GMLTLNIAEW LIPVMRNKMG LRMSNAVATC
IVLTCGECFL GVWTHYFMGA KPDWAVALWG IPGVIIGGQI GPRLAKGIDE RLLKEIFIFM
LTLIGVHLVY KYFPL
|
|---|
| |