Gene Sfum_3916 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3916 
Symbol 
ID4457736 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4769621 
End bp4770214 
Gene Length594 bp 
Protein Length197 aa 
Translation table11 
GC content67% 
IMG OID639704689 
ProductDual specificity protein phosphatase 
Protein accessionYP_848020 
Protein GI116751333 
COG category[T] Signal transduction mechanisms 
COG ID[COG2453] Predicted protein-tyrosine phosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.426927 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGATC GCAGGGAACC TGCCGCCGGC TCGCCCGGAG CAACCGAGGA GGTCGTGCCG 
CCGCTGAGGG GAAGCTACTG GGTGTTGCCC GGTAGGTTGC TGGCCGGACG ATGTCCGATA
CGGCACGACC CCGGCGACAC GGCGCGGGAT CTGGGGGTAT TGATCGAGAG CGGCATTCGC
TGCGTGATCG ACCTCATGGA CGGCAAGGAA GTGGATCGCG ACGGAAACCC TTTCCCGGAT
TACGGGGATG CGCTCACCCG GGTGGCCCGG GCCGCCGGCA CGGCCGTCAC GCGGCGAAAA
ATCCCGGTGG ACCACCTCGC GCCGGAAGAA GGCGCCATCC GGACCGTGCT CGATGCGATC
GACGGGGCTC TGGCGGAGGG AAAGCCGGTT TTCCTGCATT GCTGGGCCGG GCGGGGTCGC
ACAGGGGTGA TCGTGGGCTG CTACCTCGTG CGCAACGGTT TGAGCGGAAG AGAAGCCTTG
GAGGAAATCG CCCGTCTGCG CGGACACCTG GAAAGCGAGC ATCCCTCGCC GGAAGCCGAG
ACGCAGAGGA AGATCGTTCT GACCTGGCAG GATACCACAC GGGCTGCCGG ATGA
 
Protein sequence
MSDRREPAAG SPGATEEVVP PLRGSYWVLP GRLLAGRCPI RHDPGDTARD LGVLIESGIR 
CVIDLMDGKE VDRDGNPFPD YGDALTRVAR AAGTAVTRRK IPVDHLAPEE GAIRTVLDAI
DGALAEGKPV FLHCWAGRGR TGVIVGCYLV RNGLSGREAL EEIARLRGHL ESEHPSPEAE
TQRKIVLTWQ DTTRAAG