Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3916 |
Symbol | |
ID | 4457736 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4769621 |
End bp | 4770214 |
Gene Length | 594 bp |
Protein Length | 197 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639704689 |
Product | Dual specificity protein phosphatase |
Protein accession | YP_848020 |
Protein GI | 116751333 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2453] Predicted protein-tyrosine phosphatase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.426927 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGATC GCAGGGAACC TGCCGCCGGC TCGCCCGGAG CAACCGAGGA GGTCGTGCCG CCGCTGAGGG GAAGCTACTG GGTGTTGCCC GGTAGGTTGC TGGCCGGACG ATGTCCGATA CGGCACGACC CCGGCGACAC GGCGCGGGAT CTGGGGGTAT TGATCGAGAG CGGCATTCGC TGCGTGATCG ACCTCATGGA CGGCAAGGAA GTGGATCGCG ACGGAAACCC TTTCCCGGAT TACGGGGATG CGCTCACCCG GGTGGCCCGG GCCGCCGGCA CGGCCGTCAC GCGGCGAAAA ATCCCGGTGG ACCACCTCGC GCCGGAAGAA GGCGCCATCC GGACCGTGCT CGATGCGATC GACGGGGCTC TGGCGGAGGG AAAGCCGGTT TTCCTGCATT GCTGGGCCGG GCGGGGTCGC ACAGGGGTGA TCGTGGGCTG CTACCTCGTG CGCAACGGTT TGAGCGGAAG AGAAGCCTTG GAGGAAATCG CCCGTCTGCG CGGACACCTG GAAAGCGAGC ATCCCTCGCC GGAAGCCGAG ACGCAGAGGA AGATCGTTCT GACCTGGCAG GATACCACAC GGGCTGCCGG ATGA
|
Protein sequence | MSDRREPAAG SPGATEEVVP PLRGSYWVLP GRLLAGRCPI RHDPGDTARD LGVLIESGIR CVIDLMDGKE VDRDGNPFPD YGDALTRVAR AAGTAVTRRK IPVDHLAPEE GAIRTVLDAI DGALAEGKPV FLHCWAGRGR TGVIVGCYLV RNGLSGREAL EEIARLRGHL ESEHPSPEAE TQRKIVLTWQ DTTRAAG
|
| |