Gene Sfum_3858 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3858 
Symbol 
ID4457818 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4711569 
End bp4711997 
Gene Length429 bp 
Protein Length142 aa 
Translation table11 
GC content41% 
IMG OID639704631 
Producthypothetical protein 
Protein accessionYP_847962 
Protein GI116751275 
COG category[K] Transcription 
COG ID[COG1846] Transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0253457 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0317444 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGCAAA CTGCGATTTC AGATATAAGC AGATCATTAA TTGAGATTGC TTGGCATTTT 
GGTCCAAAAG GATTGAATGG CGAATGCTGT GACAATATTA CAATGCCGGA ATTCATAGCA
TTGGACAAAG TCGCGACTTC ACCGAATTGT CCTGTGCAAG ATGTCGGTTA TTCGCTTGGA
TTTACAAAAA GTGGTGCAAC CAGGATTGTC AATCGGCTTG AAAAAAAAGG ATATGTCGAA
AAAGTTAAAT CGCATATAGA TGCAAGGGTA TGCTGTGTGG AGATAACAAA GGCAGGGGAA
CAGGTTTTGT TATCTGCGAA TTCTCGCTAT ATGGAACAAT TCTACGCTCT TGTCTCAAAA
ATGTCGGAGT ATTCCTTGGA TGATATTGTT GATGTGCTTA CCTCAATGGC AAGAGCACTG
AAGGGCTAA
 
Protein sequence
MKQTAISDIS RSLIEIAWHF GPKGLNGECC DNITMPEFIA LDKVATSPNC PVQDVGYSLG 
FTKSGATRIV NRLEKKGYVE KVKSHIDARV CCVEITKAGE QVLLSANSRY MEQFYALVSK
MSEYSLDDIV DVLTSMARAL KG