Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3858 |
Symbol | |
ID | 4457818 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | + |
Start bp | 4711569 |
End bp | 4711997 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 639704631 |
Product | hypothetical protein |
Protein accession | YP_847962 |
Protein GI | 116751275 |
COG category | [K] Transcription |
COG ID | [COG1846] Transcriptional regulators |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0253457 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.0317444 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGCAAA CTGCGATTTC AGATATAAGC AGATCATTAA TTGAGATTGC TTGGCATTTT GGTCCAAAAG GATTGAATGG CGAATGCTGT GACAATATTA CAATGCCGGA ATTCATAGCA TTGGACAAAG TCGCGACTTC ACCGAATTGT CCTGTGCAAG ATGTCGGTTA TTCGCTTGGA TTTACAAAAA GTGGTGCAAC CAGGATTGTC AATCGGCTTG AAAAAAAAGG ATATGTCGAA AAAGTTAAAT CGCATATAGA TGCAAGGGTA TGCTGTGTGG AGATAACAAA GGCAGGGGAA CAGGTTTTGT TATCTGCGAA TTCTCGCTAT ATGGAACAAT TCTACGCTCT TGTCTCAAAA ATGTCGGAGT ATTCCTTGGA TGATATTGTT GATGTGCTTA CCTCAATGGC AAGAGCACTG AAGGGCTAA
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Protein sequence | MKQTAISDIS RSLIEIAWHF GPKGLNGECC DNITMPEFIA LDKVATSPNC PVQDVGYSLG FTKSGATRIV NRLEKKGYVE KVKSHIDARV CCVEITKAGE QVLLSANSRY MEQFYALVSK MSEYSLDDIV DVLTSMARAL KG
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