| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sfum_3851 |
|---|
| Symbol | |
|---|
| ID | 4457811 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Syntrophobacter fumaroxidans MPOB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008554 |
|---|
| Strand | + |
|---|
| Start bp | 4703431 |
|---|
| End bp | 4705278 |
|---|
| Gene Length | 1848 bp |
|---|
| Protein Length | 615 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 639704624 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_847955 |
|---|
| Protein GI | 116751268 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.0140716 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTTCCT ATCTCGTCGG ACAAGTCCGT CCCAGTCAAT TGCTCTGGAC CTATGGTCCC
GGAGCCCTGA TCGACCTGCC GAATCTTTCG GTGTTGACCA TGGGTCTCGA TCGCTGGAAT
CCGGACCGAT GCCCTCCGAT CGAGGAGGCA CGCCTACTCG CCGCCGTTCG CCGAGTGCTC
GGCCCTCAAG TGGAACGGTT GCGGATGCCC CCCTTTCTAA GGGAGGACGG CGTCGACCCC
ATGTCCGCCG AAGGCAAGAT CGGCGTGCCG GTCCGCCCCT TTCCGCGTTG GTTGAGATGC
GTCAAATGCG GCTTGCTGGC CGAATACGAT TCGGGCCTGT TCGACATCAA GGCCAACCCG
TACCGCCCTG AGCAGACCCA TTTCGTTCAT TCGAACTGCG AGAAAGGCAA GAACGCCGAT
GCGGTTCCCG CCCGTTTTCT GCTCGCCTGC AGGAACGGTC ACCTCGACGA TTTTCCGTGG
CATTGGTTCG TGCATGGCGG CCCCTCCGAG TGCAAAGGGA CGCTGCGTTT CTTCGAGCGA
GGCGCATCCC TGCAGACCGA AAACCTCTGG GTCAAATGCG ACACCTGCGA TGCGGCACGC
TCGCTAGTTC ATGCCTTCGG GCGGGAGGCG CAGGATAACC TTCCCGCCTG CCGAGGACGG
CACCCCCACC TCAACCAGTA CGAGGAATGC GGCGAGGACC CCAGAACCAT CCTCCTGGGA
GCGACCAACG GGTGGTTCCC AATCACGCTT TCGGTTCTCG CGATTCCTCT CGAACGTGAC
CAACTCGGGC AATTGATTCT GGATGGATGG GAATATTTCT CGGATGCGGA ATCGGCCGAA
GAGATCAAGG TGATCGTGAA GACCCTGGTC AAGAGCGGCA GCCTGCCGGG AATCGACAAA
TGGGATCATA GGGACATCTG GAAGGCCGTC GAAGACCGAA AGGAAGGTAG ATCGGGCACG
ACGGTCATAT CCGAGGGCGA CATCAAGGAC CCCGAGTGGG ACGTCTTGAC CTCGGACGAT
CCTCCGACGG ACTGGCCGCA TTTCCTGAGC AGCAAGACCG AAACACCGGA GGGCTATCGA
GACCGTCTGG CCAGCGTGTT GTTACTGGAA CGTCTCCGCG AAGTGAACGC CCTGATTGGC
TACACCCGGG TGGAGGCTCC AGAGGAATCG ACCGATCCAG ACGAGCGACC GCCGATGGCC
GATCTCAGCC GGAACAAGCC CGATTGGATA CCCGCCAGTG AAGTGCATGG TGAAGGGATA
TTCATCAGGT TCGACGAGAA TGCCGTGGCC GAATGGGAAA AGCAAAAAGC CGTTCAGGCC
AGAAGCCAAA AGCTGGAGGC GGGTCATCGG GGCTGGCGGA ACGCACGTGG GCTGGACCCC
GACGAGGGTT ATCCGGGCAT CAGATACGCC ATGCTGCACA CGTTCGCCCA TCTTCTCATT
CGGGAGCTGG CTCTCGAATG TGGCTACAAC GCGGCGAGCA TCCGGGAACG CATCTATGCG
AAGAGCGACA GCGAATCTCC CATGGCGGGG GTGTTGCTCT ACACGGCGGC GGCCGATTCC
GACGGGACCC TCGGTGGACT CGTCGAGCTC GGAAAACCCG AGAATCTGGG ACGCTTGATC
GAGCAGGCGC TGGATCGCGC CACCGTCTGC TCTTCCGACC CCCTCTGCTC GGAACACAAT
CCCGGTGTCG ATCGTTCGTT GCATTCCGCC GCCTGCCATG CCTGCACCTT CGTCGCCGAG
ACGTCCTGTG AACGTGGAAA TCGTTATCTG GACAGGGCTC TGCTCGTAAA AACATTCGAG
GTCTCCGACA CCGCTTTCTT CGCCGGGAAT GGAGGCTCGA ATGGATGA
|
|---|
| Protein sequence | MSSYLVGQVR PSQLLWTYGP GALIDLPNLS VLTMGLDRWN PDRCPPIEEA RLLAAVRRVL
GPQVERLRMP PFLREDGVDP MSAEGKIGVP VRPFPRWLRC VKCGLLAEYD SGLFDIKANP
YRPEQTHFVH SNCEKGKNAD AVPARFLLAC RNGHLDDFPW HWFVHGGPSE CKGTLRFFER
GASLQTENLW VKCDTCDAAR SLVHAFGREA QDNLPACRGR HPHLNQYEEC GEDPRTILLG
ATNGWFPITL SVLAIPLERD QLGQLILDGW EYFSDAESAE EIKVIVKTLV KSGSLPGIDK
WDHRDIWKAV EDRKEGRSGT TVISEGDIKD PEWDVLTSDD PPTDWPHFLS SKTETPEGYR
DRLASVLLLE RLREVNALIG YTRVEAPEES TDPDERPPMA DLSRNKPDWI PASEVHGEGI
FIRFDENAVA EWEKQKAVQA RSQKLEAGHR GWRNARGLDP DEGYPGIRYA MLHTFAHLLI
RELALECGYN AASIRERIYA KSDSESPMAG VLLYTAAADS DGTLGGLVEL GKPENLGRLI
EQALDRATVC SSDPLCSEHN PGVDRSLHSA ACHACTFVAE TSCERGNRYL DRALLVKTFE
VSDTAFFAGN GGSNG
|
|---|
| |