Gene Sfum_3831 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSfum_3831 
Symbol 
ID4457826 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSyntrophobacter fumaroxidans MPOB 
KingdomBacteria 
Replicon accessionNC_008554 
Strand
Start bp4675415 
End bp4676350 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content62% 
IMG OID639704604 
ProductGPW/gp25 family protein 
Protein accessionYP_847935 
Protein GI116751248 
COG category[R] General function prediction only 
COG ID[COG3628] Phage baseplate assembly protein W 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCTTCG ACTTTCTCGG CAAGGGATTG CGCTACCCGT TCCGGTTTCA GTCGGTATCC 
GGCGGCACCC AGATCTCGAC CGCCACCTCG CGGGAGCACG AGCACATCCG CGAAAGCATC
CTGCAGATCC TCGGCACCCG GATCGGCGAA CGGTTCATGA ATCCGGAGTT TGGCTCCAGG
CTGAAGGATC TGGTGTTCGA ACAGAACGAC GAGGTGCTCA AGGGCCTGCT GCGCCATTAC
GTGATCGACG CCATCAAGCG CTGGGAAAAG CGGGTGATCA TCACGGAGGT GCGCTTCGAC
GACCGGCCGC TGAACATCGA CGGCAACCTG CTGCTGGTAC ATATCGCCTA CCGGGTGATC
CAGAGCCAGG TGGACGGCAA CCTGGTCTAT CCCTTCTACA GAGAAGACCC GAACAATCCC
GCGCCCAGCT ATCCCCAGCC TGAAATACCC CCAGAGCCCG AACCCGATCC GGAACCACCG
CCGGTGCGCA GCGTGCGCCT GTCGCCGGAC GTGCGCTCAC TGTTCAATCT GCTCTGGTTC
GACGCGGCCG AGATGAGCCC CGATCCGGCG GATTCCTTGA TCTGGCCAGC CGGGGAATAC
GAAGTCGCCT ACATCGAGGG AGCCTTTCAG GACCGCAACG GCAAGTGGAT CGTCAGCGAT
CCGGGTGACA ACCACGGCCA TTACCTGACA TTCGAGGGAG CGCCAGAAAC GGAAGCGCCC
CAGGCCGAGC ACGGCCTCTA TCTGGCCGCG AGCGGTCTGG GCTTCGACAC ACAGAGTCAG
GCGGAAGACA ACGCCGCTGG CACCGTTCAC CGGATTACCA CGTCGGAGCC TGGCCGCATC
GGACTGTTCT ATTTCGAGGG CAAGAAGGAA TCCCACTACC TCAACAACAC CTCCGGGCAG
CCCAATCCCG TCTGGCAACT GCGCGGCCCG CTCTGA
 
Protein sequence
MSFDFLGKGL RYPFRFQSVS GGTQISTATS REHEHIRESI LQILGTRIGE RFMNPEFGSR 
LKDLVFEQND EVLKGLLRHY VIDAIKRWEK RVIITEVRFD DRPLNIDGNL LLVHIAYRVI
QSQVDGNLVY PFYREDPNNP APSYPQPEIP PEPEPDPEPP PVRSVRLSPD VRSLFNLLWF
DAAEMSPDPA DSLIWPAGEY EVAYIEGAFQ DRNGKWIVSD PGDNHGHYLT FEGAPETEAP
QAEHGLYLAA SGLGFDTQSQ AEDNAAGTVH RITTSEPGRI GLFYFEGKKE SHYLNNTSGQ
PNPVWQLRGP L