Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sfum_3733 |
Symbol | |
ID | 4457933 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Syntrophobacter fumaroxidans MPOB |
Kingdom | Bacteria |
Replicon accession | NC_008554 |
Strand | - |
Start bp | 4554943 |
End bp | 4556082 |
Gene Length | 1140 bp |
Protein Length | 379 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 639704506 |
Product | parallel beta-helix repeat-containing protein |
Protein accession | YP_847838 |
Protein GI | 116751151 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00966756 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAT CAAGAATGGT GCTCATTGGA GCAGTGGTCA GCCTGGCAAT CCTTACGGCC TCCGTCGCTC ACGCGGCCGC GCCCGGGGTC CCTGCCCCTG TCTCCCCGTC AGGTAAGGTG GCCGGCTCCA CCATCACCTT TCTCTGGAAA GCGGTTACGG GTGCGACCAA GTACCAACTG CAGGTGAAGT CCGGCTCCGT CATCAAGCTC AACACGATCT TCACCGCGGC CCAGGCGAAC TGCTCGGATG GAACCGGAAC CTGCTCCGCC CAAGCGACTT TTGGAGGCAC AGCCGCGGCC CTGACCTGGA ACCTTCGGGC AGGCAACACG GCGGGCTTCA GTGCATGGAG CGCCGCCAAG AACCTTGTCA TGACCGATGA GATGAGAACC CCCATCTCGT CTCTTCCCTA TACCATCAGC TCTCCCGGCT CCTATTTTGT CACGGGAAAC CTCACCTCAA CGGGCACCGG GATCACCGTG AATGCAAACG ATGCCACCAT CGACCTGGGC GGCTATGTTC TTACCGGGCC CGGCAGCGGG GACAACCACG GCGTTCATAT GGTCGGCAGG AAAAATGTGG AGATAAGGAA TGGGACGATC AAAGGCTTCG GAACGAATGG AATTTATGAA GCGAACGGCG GCTACTCCGA CCCCGGCCAC AGGGTCATCG GGGTCCGGGT GATTGAAAAC GGTTCCAGCG GCATCTTTCT TGTCGGTAAC CAGCACTTCA TCGAAAACTG CACTGCCATC AACAATGCTC AATATGGTAT CTATGTTGAT TACTACTCCA TCATTAGAGA GTGCACCTGT ACAGGAAATC AAAATGGTAT CTATTGCTAC TCAGGATCAA CAATTTCAGA CAATATTGCT TCACAAAATA GTGAAAATGG AATACGTGCA ATTGATGGGA ATAGTGTAAT CAACAACATA GCAATGGAAA ACGGCAACCA TGGAATAATG GCAGATGGAT ACAATACGAT TAAAAACAAC ACGACTTCCT GGAACAAGTA TAGTGGAATC CAGCTTGGCA CCTACAGTGT GCTGGATGGA AACACCTCTT ACCTCAACAA CCAATCCGGA GGTGCCTATC CAAACATAAG CGATTGCGTG ACTTGTGCAT CGGGGATCAA CGTGAAGTAG
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Protein sequence | MKTSRMVLIG AVVSLAILTA SVAHAAAPGV PAPVSPSGKV AGSTITFLWK AVTGATKYQL QVKSGSVIKL NTIFTAAQAN CSDGTGTCSA QATFGGTAAA LTWNLRAGNT AGFSAWSAAK NLVMTDEMRT PISSLPYTIS SPGSYFVTGN LTSTGTGITV NANDATIDLG GYVLTGPGSG DNHGVHMVGR KNVEIRNGTI KGFGTNGIYE ANGGYSDPGH RVIGVRVIEN GSSGIFLVGN QHFIENCTAI NNAQYGIYVD YYSIIRECTC TGNQNGIYCY SGSTISDNIA SQNSENGIRA IDGNSVINNI AMENGNHGIM ADGYNTIKNN TTSWNKYSGI QLGTYSVLDG NTSYLNNQSG GAYPNISDCV TCASGINVK
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